RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZNF155Q12901 538 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 SF1Q15637 639 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 MSS51Q4VC12 460 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ANKRD54Q6NXT1 300 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 C14orf80Q86SX3 495 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 DCAF13Q9NV06 445 aaKnown RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ELOA3DA6NLF2 546 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 MYCLP1P12525 358 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-204ENST00000375290 OXTRP30559 389 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 RAPSNQ13702 412 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ELOA3BQ3SY89 546 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ATAT1Q5SQI0 421 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PGM2L1Q6PCE3 622 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 AMZ2Q86W34 360 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ELOA3Q8NG57 546 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 ARL6Q9H0F7 186 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 GPATCH2Q9NW75 528 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 TNFRSF10BO14763 440 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 OR52E4Q8NGH9 312 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 PRRT1Q99946 306 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 C4AP0C0L4 1744 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
PTCH1-204ENST00000375290 C12orf71A8MTZ7 269 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SEC14L2O76054 403 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 FHP07954 510 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 OSMP13725 252 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ARF5P84085 180 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 CCDC54Q8NEL0 328 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 OR13F1Q8NGS4 319 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF587Q96SQ5 575 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 Q9N2J8 555 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 MRPS30Q9NP92 439 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF821O75541 412 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ATP1B2P14415 290 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 EDNRAP25101 427 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 PROKR2Q8NFJ6 384 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 GRIN3AQ8TCU5 1115 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 T-ENOLP0DO92 83 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 DLX5P56178 289 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 CDK5R2Q13319 367 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 TMEM35AQ53FP2 167 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 PXKQ7Z7A4 578 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 THOC6Q86W42 341 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 AP1S3Q96PC3 154 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SYT4Q9H2B2 425 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SAGE1Q9NXZ1 904 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 EDARQ9UNE0 448 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 TSPAN3O60637 253 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 TP53P04637 393 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 RAB40ALP0C0E4 278 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 POU2F1P14859 743 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 GLP1RP43220 463 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SOWAHAQ2M3V2 549 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ALG10Q5BKT4 473 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SPANXN4Q5MJ08 99 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 RAB40AQ8WXH6 277 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SLCO5A1Q9H2Y9 848 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 BTNL2Q9UIR0 455 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ALPPL2P10696 532 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 NRG3P56975 720 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 MAP2K5Q13163 448 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 LINGO4Q6UY18 593 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 C15orf39Q6ZRI6 1047 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 URM1Q9BTM9 101 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SERINC1Q9NRX5 453 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 A0A075B6Q4 140 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 UCHL1P09936 223 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 MPP7Q5T2T1 576 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ABCB8Q9NUT2 735 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 RBFOX1Q9NWB1 397 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 FKBPLQ9UIM3 349 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 TBC1D3BA6NDS4 549 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 F5H0A9 414 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 KDELR3O43731 214 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 IFNA4P05014 189 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 AMD1P17707 334 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 FDXRP22570 491 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 ART1P52961 327 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 PCDH1Q08174 1060 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 PRAMEF14Q5SWL7 426 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 TMIGD1Q6UXZ0 262 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SLC51AQ86UW1 340 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 PTRH1Q86Y79 214 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 OR56A3Q8NH54 315 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 HASPINQ8TF76 798 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 DUS3LQ96G46 650 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 OR5B12Q96R08 314 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 RDH14Q9HBH5 336 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 B3GNT2Q9NY97 397 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 EME2A4GXA9 379 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 FANCGO15287 622 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 TLE3Q04726 772 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 CDC20Q12834 499 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 GANABQ14697 944 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 NOL9Q5SY16 702 aaKnown RBP9.81□□□□□ -0.84
PTCH1-204ENST00000375290 GAREM2Q75VX8 874 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
PTCH1-204ENST00000375290 CPA6Q8N4T0 437 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms