RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ALDOBP05062 364 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CD48P09326 243 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 GRK6P43250 576 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 DHPSP49366 369 aaPredicted RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 TAS2R20P59543 309 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 C4orf17Q53FE4 359 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 BRI3BPQ8WY22 251 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF98A6NK75 572 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 AGRPO00253 132 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 RAB40ALP0C0E4 278 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 C1GALT1C1LP0DN25 315 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PAN2Q504Q3 1202 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 TMEM236Q5W0B7 351 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NAGSQ8N159 534 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZBTB44Q8NCP5 570 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NRG4Q8WWG1 115 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 RAB40AQ8WXH6 277 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CYP2S1Q96SQ9 504 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 MYOCQ99972 504 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CCDC3Q9BQI4 270 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CLMPQ9H6B4 373 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 B4GALT5O43286 388 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 RENP00797 406 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PSMB1P20618 241 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 RAG2P55895 527 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ARFRP1Q13795 201 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PDSS1Q5T2R2 415 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 GTF3C2Q8WUA4 911 aaPredicted RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 TIMM29Q9BSF4 260 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PRDM9Q9NQV7 894 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 BAZ2BQ9UIF8 2168 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 FOXD2O60548 495 aaPredicted RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 TMEM63AO94886 807 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SFTPBP07988 381 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 RBMS1P29558 406 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 HTR3AP46098 478 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PER3P56645 1201 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF616Q08AN1 781 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PTPRRQ15256 657 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 YIPF5Q969M3 257 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TMEM175Q9BSA9 504 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 HOXD1Q9GZZ0 328 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 KLHL42Q9P2K6 505 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 INTS6Q9UL03 887 aaKnown RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 ANKUB1A6NFN9 424 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF487B1APH4 448 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ITGAMP11215 1152 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NAT2P11245 290 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ENGP17813 658 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 KCNJ5P48544 419 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 FAM69CQ0P6D2 419 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 KIAA0141Q14154 515 aaPredicted RBP6.39□□□□□ -1.39
UBR4-204ENST00000375254 MOGAT2Q3SYC2 334 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 GTDC1Q4AE62 458 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NANOGP8Q6NSW7 305 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 OR1J1Q8NGS3 322 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 CYP2W1Q8TAV3 490 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 TMIGD2Q96BF3 282 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF778Q96MU6 729 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 KATNBL1Q9H079 304 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NANOGQ9H9S0 305 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 AMBNQ9NP70 447 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 BNIP3LO60238 219 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 SERPINA7P05543 415 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 PTPRAP18433 802 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 NDUFA6P56556 154 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 ZNF619Q8N2I2 560 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 C14orf79Q96F83 325 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 FBXL20Q96IG2 436 aa6.39□□□□□ -1.39
UBR4-204ENST00000375254 REREQ9P2R6 1566 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 EHBP1L1Q8N3D4 1523 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 K7ERU9 68 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 PHOX2AO14813 284 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 KLRC4O43908 158 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 GABRA2P47869 451 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TAF1AQ15573 450 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 NIPAL3Q6P499 406 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZNF783Q6ZMS7 281 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 STRADAQ7RTN6 431 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 GALNTL5Q7Z4T8 443 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 LYSMD2Q8IV50 215 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 SULF1Q8IWU6 871 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 MAL2Q969L2 176 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 NELL2Q99435 816 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CRB3Q9BUF7 120 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 HIPK2Q9H2X6 1198 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 FBRSL1Q9HCM7 1045 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 PRSS51A0A1B0GVH4 220 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 MROH6A6NGR9 719 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TMEM210A6NLX4 147 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ATG13O75143 517 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 C8GP07360 202 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CAMK2DQ13557 499 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 KLHDC8BQ8IXV7 354 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CPNE4Q96A23 557 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 BEX2Q9BXY8 128 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TMEM134Q9H6X4 195 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 HMX1Q9NP08 348 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 REV1Q9UBZ9 1251 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 TIAM1Q13009 1591 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms