RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 HMX3A6NHT5 357 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 WWP2O00308 870 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 ALX3O95076 343 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 ANXA4P09525 319 aaPredicted RBP10.62□□□□□ -0.71
CCDC40-203ENST00000374877 HNRNPA1P09651 372 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC40-203ENST00000374877 CBSLP0DN79 551 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 CBSP35520 551 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 CSKP41240 450 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 SLC6A12P48065 614 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 RORCP51449 518 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 AP1S1P61966 158 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 GPM6BQ13491 265 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 ZNF79Q15937 498 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 GPR33Q49SQ1 333 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 MFSD4BQ5TF39 518 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 FAM109BQ6ICB4 259 aaPredicted RBP10.62□□□□□ -0.71
CCDC40-203ENST00000374877 ADNP2Q6IQ32 1131 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 ZNF438Q7Z4V0 828 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 KLF16Q9BXK1 252 aaPredicted RBP10.62□□□□□ -0.71
CCDC40-203ENST00000374877 CHST8Q9H2A9 424 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 HHATLQ9HCP6 504 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 TRPV5Q9NQA5 729 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 CORO2BQ9UQ03 480 aa10.62□□□□□ -0.71
CCDC40-203ENST00000374877 YBX2Q9Y2T7 364 aaKnown RBP10.62□□□□□ -0.71
CCDC40-203ENST00000374877 C1orf226A1L170 272 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 FAM227AF5H4B4 570 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 YES1P07947 543 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 FHP07954 510 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 POLR2EP19388 210 aaKnown RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CD22P20273 847 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CYP2A7P20853 494 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 PPIBP23284 216 aaKnown RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 FEN1P39748 380 aaKnown RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 EPHA5P54756 1037 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 GNG2P59768 71 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SCN1BQ07699 218 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CDH18Q13634 790 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 TTC23LQ6PF05 361 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 TPGS1Q6ZTW0 290 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 NOXA1Q86UR1 476 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SLC44A2Q8IWA5 706 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 ASAH2Q9NR71 780 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 GIMAP4Q9NUV9 329 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CLEC2DQ9UHP7 191 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 MBD1Q9UIS9 605 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 ACSL6Q9UKU0 697 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 HCN4Q9Y3Q4 1203 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 PRAMEF25A6NGN4 478 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 GADD45GO95257 159 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 C8GP07360 202 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CHRM5P08912 532 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 PSMA1P25786 263 aaKnown RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SCARB2Q14108 478 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 ATP13A5Q4VNC0 1218 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 COL13A1Q5TAT6 717 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 PRR23CQ6ZRP0 262 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 RFLNAQ6ZTI6 216 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CADM2Q8N3J6 435 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 MED8Q96G25 268 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SPATA9Q9BWV2 254 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 DNAJC27Q9NZQ0 273 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 ENTPD6O75354 484 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 PAPLNO95428 1278 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 OR56A5P0C7T3 313 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CHMP24386 653 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 PTX3P26022 381 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 HNMTP50135 292 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 GALK2Q01415 458 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 E2F2Q14209 437 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 FAM209AQ5JX71 171 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 C19orf48Q6RUI8 117 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CAMKK1Q8N5S9 505 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 ASB11Q8WXH4 323 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SLC7A6Q92536 515 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 MRPS31Q92665 395 aaKnown RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 TRMT61AQ96FX7 289 aaKnown RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SRRQ9GZT4 340 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SLC22A4Q9H015 551 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 IRF2BPLQ9H1B7 796 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 ZDHHC3Q9NYG2 299 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 CNOT2Q9NZN8 540 aaKnown RBP10.61□□□□□ -0.71
CCDC40-203ENST00000374877 MSRAQ9UJ68 235 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 SNX7Q9UNH6 387 aa10.61□□□□□ -0.71
CCDC40-203ENST00000374877 NINQ8N4C6 2090 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 SMIM30A4D0T7 59 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 C2orf78A6NCI8 922 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 NPIPB15A6NHN6 443 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-203ENST00000374877 FAM25AB3EWG3 89 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 FAM25CB3EWG5 89 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 FAM25GB3EWG6 89 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 E7EQ34 232 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 TMCC2O75069 709 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 MTX2O75431 263 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 ETHE1O95571 254 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 IRS1P35568 1242 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 B4GALNT1Q00973 533 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 TEKQ02763 1124 aa10.6□□□□□ -0.71
CCDC40-203ENST00000374877 LEXMQ3ZCV2 418 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms