RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ELOCQ15369 112 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 ZNF773Q6PK81 442 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 KCTD8Q6ZWB6 473 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 AMZ2Q86W34 360 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 RIMKLAQ8IXN7 391 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 KLHDC8AQ8IYD2 350 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 OXR1Q8N573 874 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 OR2T12Q8NG77 320 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 GPBAR1Q8TDU6 330 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 S100ZQ8WXG8 99 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 GLMNQ92990 594 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 MAGED4Q96JG8 741 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 OR52E6Q96RD3 313 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 ARPC5LQ9BPX5 153 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 EHD1Q9H4M9 534 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 HMG20AQ9NP66 347 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 AKIP1Q9NQ31 210 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.65□□□□□ -0.22
HMGA1-203ENST00000374116 ZNF639Q9UID6 485 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 GPR34Q9UPC5 381 aa13.65□□□□□ -0.22
HMGA1-203ENST00000374116 CFAP20Q9Y6A4 193 aaKnown RBP13.65□□□□□ -0.22
HMGA1-203ENST00000374116 PRAMEF33A0A0G2JMD5 474 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 GSTA4O15217 222 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 CASC3O15234 703 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 NDUFB5O43674 189 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 UGDHO60701 494 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 ERN1O75460 977 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 NTRK1P04629 796 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 RAP2AP10114 183 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 PDHA2P29803 388 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SOX11P35716 441 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 FAM98BQ52LJ0 330 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 RUNDC3AQ59EK9 446 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 PRAMEF9Q5VWM5 478 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 USP51Q70EK9 711 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 ANKRD13BQ86YJ7 626 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 ZC3H7AQ8IWR0 971 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SLC7A5P1Q8MH63 180 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 KRTCAP2Q8N6L1 136 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 RHBDD1Q8TEB9 315 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 VMP1Q96GC9 406 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SH3YL1Q96HL8 342 aaPredicted RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 RNF145Q96MT1 663 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SEPHS2Q99611 448 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 CCM2Q9BSQ5 444 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 THUMPD3Q9BV44 507 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 NAA50Q9GZZ1 169 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SLC22A14Q9Y267 594 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 CEP250Q9BV73 2442 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 ANKRD34BA5PLL1 514 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 ARHGEF33A8MVX0 844 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 LMO7DNF2Z398 122 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 CLOCKO15516 846 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SIGLEC6O43699 453 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 PCDHGA12O60330 932 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 IDUAP35475 653 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 HPCAL1P37235 193 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 MAPK9P45984 424 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 PLIN5Q00G26 463 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 PCDH1Q08174 1060 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 BCL7AQ4VC05 210 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SLX4IPQ5VYV7 408 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 LIPJQ5W064 366 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 ATG9BQ674R7 924 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 FKBP9P1Q75LS8 142 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 SLC22A15Q8IZD6 547 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 PARP8Q8N3A8 854 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 OR52E4Q8NGH9 312 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 CHAC2Q8WUX2 184 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 ATL1Q8WXF7 558 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 POP5Q969H6 163 aaKnown RBP13.64□□□□□ -0.23
HMGA1-203ENST00000374116 TESCQ96BS2 214 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 BCL7BQ9BQE9 202 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 UGT2B28Q9BY64 529 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 RAD21L1Q9H4I0 556 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 MAN2B2Q9Y2E5 1009 aa13.64□□□□□ -0.23
HMGA1-203ENST00000374116 A0A096LPI6 279 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 TRBV5-3A0A0A0MS03 114 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 MGAT4DA6NG13 374 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 PDZK1P1A8MUH7 402 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 GPR89AB7ZAQ6 455 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-203ENST00000374116 SCELO95171 688 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 GPR89BP0CG08 455 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 JUPP14923 745 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 S100A3P33764 101 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 CAPGP40121 348 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 CHRNB3Q05901 458 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 CDC20Q12834 499 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 SELENBP1Q13228 472 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 CCNYL2Q5T2Q4 361 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 LRIF1Q5T3J3 769 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 C6orf183Q5T699 404 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 FRG2Q64ET8 278 aa13.63□□□□□ -0.23
HMGA1-203ENST00000374116 GTF2IRD2BQ6EKJ0 949 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms