RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SSR3Q9UNL2 185 aa7.48□□□□□ -1.21
HERC4-202ENST00000373700 ABCG2Q9UNQ0 655 aa7.48□□□□□ -1.21
HERC4-202ENST00000373700 PCDHB11Q9Y5F2 797 aa7.48□□□□□ -1.21
HERC4-202ENST00000373700 GABRR3A8MPY1 467 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ARHGEF9O43307 516 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ARHGEF15O94989 841 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ATE1O95260 518 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 LCKP06239 509 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 STSP08842 583 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 LAMP2P13473 410 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CD9P21926 228 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 PSMA1P25786 263 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 AOAHP28039 575 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 RPL4P36578 427 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 SMIM11AP58511 58 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 BTN3A2P78410 334 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 MRPL28Q13084 256 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 EXOC3L2Q2M3D2 409 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 PYDC2Q56P42 97 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 COQ5Q5HYK3 327 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 KIAA1161Q6NSJ0 714 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CADM2Q8N3J6 435 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 DPP10Q8N608 796 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 TCEANCQ8N8B7 351 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 PLA2G15Q8NCC3 412 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 OR9Q2Q8NGE9 314 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ENKURQ8TC29 256 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ASB11Q8WXH4 323 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 FGF14Q92915 247 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 UBE2FQ969M7 185 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ZNF689Q96CS4 500 aaPredicted RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 ASB16Q96NS5 453 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 SLC2A11Q9BYW1 496 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 OR51V1Q9H2C8 321 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 IKZF5Q9H5V7 419 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 TAS2R9Q9NYW1 312 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CASKO14936 926 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 SNPHO15079 494 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 VILLO15195 856 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CLPXO76031 633 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 OR12D1P0DN82 309 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 PCDH1Q08174 1060 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ST3GAL4Q11206 333 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 NPRL3Q12980 569 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 IQCCQ4KMZ1 466 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 RUNDC3AQ59EK9 446 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 RPS26P11Q5JNZ5 115 aaPredicted RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 TRIM73Q86UV7 250 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 DCP2Q8IU60 420 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 OR4N5Q8IXE1 308 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 SLC5A8Q8N695 610 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 DNAJB8Q8NHS0 232 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 WDR48Q8TAF3 677 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 SMPDL3AQ92484 453 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 FAM129BQ96TA1 746 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 SLC17A9Q9BYT1 436 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 IL20RAQ9UHF4 553 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CNOT11Q9UKZ1 510 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 NEU3Q9UQ49 428 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 PLEKHM1Q9Y4G2 1056 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CEPT1Q9Y6K0 416 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 TDRD15B5MCY1 1934 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 H0YAE9 185 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 H3BMQ9 156 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 BOLA2-SMG1P6H3BVE0 249 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CDK4P11802 303 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 CD247P20963 164 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 TCEA1P23193 301 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 HRH2P25021 359 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 P2RY2P41231 377 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 XKP51811 444 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 SRP54P61011 504 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 EIF4HQ15056 248 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 TSTQ16762 297 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 TMEM215Q68D42 235 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 LILRA6Q6PI73 481 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 FAM217AQ8IXS0 508 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 OXR1Q8N573 874 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 PHOSPHO2Q8TCD6 241 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 ZNF480Q8WV37 535 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 S100ZQ8WXG8 99 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 HDAC2Q92769 488 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 SLC38A4Q969I6 547 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 RGMAQ96B86 450 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 COG8Q96MW5 612 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 FCRL4Q96PJ5 515 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 MYADMQ96S97 322 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 WDR12Q9GZL7 423 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 MS4A12Q9NXJ0 267 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 GSTK1Q9Y2Q3 226 aa7.47□□□□□ -1.21
HERC4-202ENST00000373700 YBX2Q9Y2T7 364 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 DICER1Q9UPY3 1922 aaKnown RBP7.47□□□□□ -1.21
HERC4-202ENST00000373700 H0Y8X5 98 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 CD160O95971 181 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 CPN2P22792 545 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 RPS3P23396 243 aaKnown RBP eCLIP7.46□□□□□ -1.218e-6■■□□□ 12.7
HERC4-202ENST00000373700 TALDO1P37837 337 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 ZNF77Q15935 545 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 SLC36A3Q495N2 470 aa7.46□□□□□ -1.21
HERC4-202ENST00000373700 FAM131AQ6UXB0 335 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms