RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 CLRN1P58418 232 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 ARF3P61204 181 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 HERV-K104P61576 105 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 ARF1P84077 181 aaKnown RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 OTUB2Q96DC9 234 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 DOHHQ9BU89 302 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 SDHDO14521 159 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 COCHO43405 550 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 ZNF806P0C7X5 589 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 C1GALT1C1LP0DN25 315 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 ARRB1P49407 418 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 SLC35F1Q5T1Q4 408 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 TMIEQ8NEW7 156 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 SMG9Q9H0W8 520 aaKnown RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 SPEF1Q9Y4P9 236 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 C2orf74A8MZ97 194 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 FZD9O00144 591 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 PFKMP08237 780 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 HRH2P25021 359 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 GKP32189 559 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 LRIF1Q5T3J3 769 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 C6orf89Q6UWU4 347 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 GALNT12Q8IXK2 581 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 TIGD4Q8IY51 512 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 STOML3Q8TAV4 291 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 FCAMRQ8WWV6 532 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 TMEM41AQ96HV5 264 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 TXNRD2Q9NNW7 524 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 GMEB2Q9UKD1 530 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 MAFFQ9ULX9 164 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 SH2B3Q9UQQ2 575 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 UBR1Q8IWV7 1749 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 GLOD5A6NK44 160 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 M0R036 132 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 CLEC3AO75596 197 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 VNN2O95498 520 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 HOXD8P13378 290 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 HSD3B1P14060 373 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 LHCGRP22888 699 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 HSD3B2P26439 372 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 FADDQ13158 208 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 ZNF267Q14586 743 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 GLT8D1Q68CQ7 371 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 RPL13AP3Q6NVV1 102 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 MRGPRX2Q96LB1 330 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 A0A1W2PPW3 197 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 UNC119BA6NIH7 251 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 H7BY64 318 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 GALTP07902 379 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 PROZP22891 400 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 EDNRBP24530 442 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 UPP1Q16831 310 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 KCTD9Q7L273 389 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 UBE2Q1Q7Z7E8 422 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 Q8N9G6 341 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 OR51G2Q8NGK0 314 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 TRIM43Q96BQ3 446 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-203ENST00000373672 PRAP1Q96NZ9 151 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 VRTNQ9H8Y1 702 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 ABCC6O95255 1503 aa17.36■□□□□ 0.37
COL16A1-203ENST00000373672 H3BSH0 61 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 SOX1O00570 391 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 EEDO75530 441 aaKnown RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 LEFTY1O75610 366 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 C7P10643 843 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 PFKLP17858 780 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 POLR2CP19387 275 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 MLLT10P55197 1068 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 ID2Q02363 134 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 IRF7Q92985 503 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 ZNF717Q9BY31 904 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 A0A1W2PPL8 197 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 SLC33A1O00400 549 aaPredicted RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 HEXBP07686 556 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 IL3P08700 152 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 OR12D1P0DN82 309 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 CCL5P13501 91 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 TIA1P31483 386 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 GRIA2P42262 883 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 Q6ZVL8 140 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 ERN2Q76MJ5 926 aaKnown RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 OR6N2Q8NGY6 317 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 LIN28AQ9H9Z2 209 aaKnown RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 DNAJB5O75953 348 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 PRLP01236 227 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 DCKP27707 260 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 KCNJ5P48544 419 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 ST3GAL4Q11206 333 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 PLEKHG7Q6ZR37 379 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 KCNN1Q92952 543 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 MUS81Q96NY9 551 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 IRF2BPLQ9H1B7 796 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 ADAMTS10Q9H324 1103 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 PRTFDC1Q9NRG1 225 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 ASB6Q9NWX5 421 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 ERP29P30040 261 aaKnown RBP17.35■□□□□ 0.37
COL16A1-203ENST00000373672 RING1Q06587 406 aa17.35■□□□□ 0.37
COL16A1-203ENST00000373672 CYP27C1Q4G0S4 372 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms