RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ZNF227Q86WZ6 799 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CENPSQ8N2Z9 138 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 MS4A15Q8N5U1 240 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 GDPD1Q8N9F7 314 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 UXS1Q8NBZ7 420 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 OR52J3Q8NH60 311 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 OR10G6Q8NH81 332 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 BMFQ96LC9 184 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 WRAP53Q9BUR4 548 aaKnown RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 HOXD1Q9GZZ0 328 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 SNTG1Q9NSN8 517 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 ABI3Q9P2A4 366 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 B4GALT6Q9UBX8 382 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 HTR3EA5X5Y0 456 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 RPL17P18621 184 aaKnown RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 STOMP27105 288 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 GCAP28676 217 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CBX5P45973 191 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 TMEM115Q12893 351 aaPredicted RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 NPRL3Q12980 569 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CCINQ13939 588 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 RABL3Q5HYI8 236 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 FAM26DQ5JW98 314 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 LRIF1Q5T3J3 769 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 SLC27A4Q6P1M0 643 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 LCTLQ6UWM7 567 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 RNF19BQ6ZMZ0 732 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 TCEAL8Q8IYN2 117 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 TOMM5Q8N4H5 51 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 HDDC3Q8N4P3 179 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 OR52E4Q8NGH9 312 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 NT5C3BQ969T7 300 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 ASPNQ9BXN1 380 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 INPP5EQ9NRR6 644 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 LILRB3O75022 631 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 GSTT2P0CG29 244 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CHRM1P11229 460 aaPredicted RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 GPX3P22352 226 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 ADRA1AP35348 466 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 HNF1BP35680 557 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 ETV6P41212 452 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 RPS13P62277 151 aaKnown RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 LRP8Q14114 963 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 TSTQ16762 297 aaKnown RBP10.19□□□□□ -0.78
PGK1-201ENST00000373316 TOR1AIP1Q5JTV8 583 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 NXPE4Q6UWF7 544 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 PAQR9Q6ZVX9 377 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 LARP4Q71RC2 724 aaKnown RBP eCLIP10.19□□□□□ -0.781e-7■□□□□ 11.3
PGK1-201ENST00000373316 MARCH9Q86YJ5 346 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 OR10T2Q8NGX3 314 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 TMEM125Q96AQ2 219 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 SCRN2Q96FV2 425 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 ZSWIM3Q96MP5 696 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 TRIM39Q9HCM9 518 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 MCUBQ9NWR8 336 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 CD84Q9UIB8 345 aa10.19□□□□□ -0.78
PGK1-201ENST00000373316 PRAMEF33A0A0G2JMD5 474 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 SLC22A31A6NKX4 558 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 FAM72CH0Y354 149 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 E2F3O00716 465 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 TBX1O43435 398 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 PROM1O43490 865 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 PRAMEF10O60809 474 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 MTRF1O75570 445 aaKnown RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 MT-ND2P03891 347 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 BCHEP06276 602 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 KLK1P06870 262 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 ALPIP09923 528 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 GNALP38405 381 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 CYP4F8P98187 520 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 BNIP3Q12983 259 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 FAM72AQ5TYM5 149 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 FAM72DQ6L9T8 149 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 CXorf57Q6NSI4 855 aaKnown RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 ERN2Q76MJ5 926 aaKnown RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 FAM72BQ86X60 149 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 TEX26Q8N6G2 289 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 OR10H4Q8NGA5 316 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 FAM174AQ8TBP5 190 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 DUS3LQ96G46 650 aaKnown RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 DGAT2Q96PD7 388 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 ACOT13Q9NPJ3 140 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 MTMR10Q9NXD2 777 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 NUFIP1Q9UHK0 495 aaKnown RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 STC2O76061 302 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 CLCN7P51798 805 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 PSPHP78330 225 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 DECR1Q16698 335 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 INAVAQ3KP66 663 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 OR52E8Q6IFG1 317 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 TMEM145Q8NBT3 493 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 RNASE11Q8TAA1 199 aaKnown RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 SLC7A13Q8TCU3 470 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 CLCC1Q96S66 551 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 GPN2Q9H9Y4 310 aaPredicted RBP10.18□□□□□ -0.78
PGK1-201ENST00000373316 FANCFQ9NPI8 374 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 ADAM29Q9UKF5 820 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 LRRN3E7EW58 273 aa10.18□□□□□ -0.78
PGK1-201ENST00000373316 PDYNP01213 254 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms