RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 FGF13Q92913 245 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 RAD51AP1Q96B01 352 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 MACROD1Q9BQ69 325 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 WFDC6Q9BQY6 131 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 FAIMQ9NVQ4 179 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 GPR34Q9UPC5 381 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 WDR37Q9Y2I8 494 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 FUCA1P04066 466 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 TGFBR2P37173 567 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 LIPAP38571 399 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 PIK3CBP42338 1070 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 PHEXP78562 749 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 HSPB3Q12988 150 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 CENPSQ8N2Z9 138 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 TMCO5AQ8N6Q1 288 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 LHX9Q9NQ69 397 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 ACER3Q9NUN7 267 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 GPR83Q9NYM4 423 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 ZNF226Q9NYT6 803 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 PCDHGA2Q9Y5H1 932 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 CKAP5Q14008 2032 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 ADAMDEC1O15204 470 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 PTX3P26022 381 aaPredicted RBP22.71■■□□□ 1.23
CDK9-201ENST00000373264 MICAQ29983 383 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 WSCD2Q2TBF2 565 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 TMEM52BQ4KMG9 183 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 PIP5KL1Q5T9C9 394 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 EGFLAMQ63HQ2 1017 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 PNCKQ6P2M8 343 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 TRIM40Q6P9F5 258 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 OXR1Q8N573 874 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 COX14Q96I36 57 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 COPS4Q9BT78 406 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 XKR8Q9H6D3 395 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 TMEM38AQ9H6F2 299 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 TAS2R16Q9NYV7 291 aa22.71■■□□□ 1.23
CDK9-201ENST00000373264 NUP210Q8TEM1 1887 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 KIF26AQ9ULI4 1882 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 TRBC2A0A5B9 178 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 OR2A25A4D2G3 310 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 NADKO95544 446 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 GGT2P36268 569 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 CRISP3P54108 245 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 TAS2R38P59533 333 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 CDK3Q00526 305 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 PUM1Q14671 1186 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDK9-201ENST00000373264 GET4Q7L5D6 327 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 PRSS48Q7RTY5 328 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 LSRQ86X29 649 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 TRUB1Q8WWH5 349 aaKnown RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 SUSD6Q92537 303 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 OTUB1Q96FW1 271 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 BTBD2Q9BX70 525 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 EPS8L2Q9H6S3 715 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 MAPRE3Q9UPY8 281 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 MYO9BQ13459 2157 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 PRR23AA6NEV1 266 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 SOBPA7XYQ1 873 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 DPM1O60762 260 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 NFATC1O95644 943 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 ADRA2AP08913 450 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 DRD3P35462 400 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 PCBP3P57721 371 aaKnown RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 LCTLQ6UWM7 567 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 CEACAM20Q6UY09 585 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 HMGN2P46Q86SG4 172 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 C17orf64Q86WR6 236 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 P3H2Q8IVL5 708 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 TM4SF18Q96CE8 201 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 PPP1R16AQ96I34 528 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 ZNF514Q96K75 400 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 MENTQ9BUN1 341 aa22.7■■□□□ 1.22
CDK9-201ENST00000373264 TEX10Q9NXF1 929 aaPredicted RBP22.7■■□□□ 1.22
CDK9-201ENST00000373264 M0R3G1 203 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 VEGFDO43915 354 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 TMPRSS11DO60235 418 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 SEMA7AO75326 666 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 PRKRAO75569 313 aaKnown RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 BCHEP06276 602 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 ARAFP10398 606 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 CD36P16671 472 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 KELP23276 732 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 BSGP35613 385 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 ST13P50502 369 aaKnown RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 CLCNKAP51800 687 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 MAPK12P53778 367 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 KHDRBS2Q5VWX1 349 aaKnown RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 DCUN1D3Q8IWE4 304 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 LINC01555Q8NAE3 123 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 EXOSC8Q96B26 276 aaKnown RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 CHFRQ96EP1 664 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 ANKDD1BA6NHY2 528 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 BOLA2-SMG1P6H3BVE0 249 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 FFAR1O14842 300 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 MID1O15344 667 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 LCMT2O60294 686 aaKnown RBP22.69■■□□□ 1.22
CDK9-201ENST00000373264 PCDH8O95206 1070 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 RB1P06400 928 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 OPRD1P41143 372 aa22.69■■□□□ 1.22
CDK9-201ENST00000373264 XCR1P46094 333 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms