RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 CASP8AP2Q9UKL3 1982 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 MEIOCA2RUB1 952 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 LATS1O95835 1130 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 DAB2P98082 770 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 RBBP4Q09028 425 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 ZNF763Q0D2J5 394 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 CDK10Q15131 360 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 IER5LQ5T953 404 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 KIAA1841Q6NSI8 718 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 PAQR6Q6TCH4 344 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 ARMCX6Q7L4S7 300 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 RASGRP3Q8IV61 690 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 FAM46DQ8NEK8 389 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 ASZ1Q8WWH4 475 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 TMEM246Q9BRR3 403 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 ATP6V1HQ9UI12 483 aa15.66■□□□□ 0.1
SDC4-201ENST00000372733 TLR4O00206 839 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 IMPA1P29218 277 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 CRYBB2P43320 205 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 CCL23P55773 120 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 SNRPD1P62314 119 aaKnown RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 PSPHP78330 225 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 TSTA3Q13630 321 aaPredicted RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 GPR162Q16538 588 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 PRSS53Q2L4Q9 553 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 ZNF770Q6IQ21 691 aaPredicted RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 FAM180BQ6P0A1 224 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 C22orf39Q6P5X5 142 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 COMMD6Q7Z4G1 85 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 NPAS4Q8IUM7 802 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.65■□□□□ 0.1
SDC4-201ENST00000372733 OXR1Q8N573 874 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 GOT1L1Q8NHS2 421 aaPredicted RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 WDR48Q8TAF3 677 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 NEIL2Q969S2 332 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 TMEM38AQ9H6F2 299 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 ELAC1Q9H777 363 aaKnown RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 SLC25A19Q9HC21 320 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 PAQR5Q9NXK6 330 aaPredicted RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 KLHL20Q9Y2M5 609 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 HELZP42694 1942 aaKnown RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 FADS2P1A8MWK0 482 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 FFAR1O14842 300 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 SCO2O43819 266 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 MPZL2O60487 215 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 CYP17A1P05093 508 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 HMGA2P52926 109 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 RHAGQ02094 409 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.65■□□□□ 0.1
SDC4-201ENST00000372733 KCNC3Q14003 757 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 DUSP7Q16829 419 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 SYTL3Q4VX76 610 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 CRB2Q5IJ48 1285 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 RPS26P11Q5JNZ5 115 aaPredicted RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 TRIM40Q6P9F5 258 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 DNAJB7Q7Z6W7 309 aaPredicted RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 PPCDCQ96CD2 204 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 TRMT2BQ96GJ1 504 aaKnown RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 METTL2AQ96IZ6 378 aaKnown RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 SLC6A18Q96N87 628 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 WRAP53Q9BUR4 548 aaKnown RBP15.65■□□□□ 0.1
SDC4-201ENST00000372733 BEX2Q9BXY8 128 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 SH2B3Q9UQQ2 575 aa15.65■□□□□ 0.1
SDC4-201ENST00000372733 TSPAN6O43657 245 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 PSIP1O75475 530 aaKnown RBP15.64■□□□□ 0.1
SDC4-201ENST00000372733 SLCO2B1O94956 709 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 IFNW1P05000 195 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 HBQ1P09105 142 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 PIPP12273 146 aaPredicted RBP15.64■□□□□ 0.1
SDC4-201ENST00000372733 CSTF2P33240 577 aaKnown RBP eCLIP15.64■□□□□ 0.1
SDC4-201ENST00000372733 RORCP51449 518 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 LIM2P55344 173 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 PCBP3P57721 371 aaKnown RBP15.64■□□□□ 0.1
SDC4-201ENST00000372733 VEPH1Q14D04 833 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 SPHARQ15513 63 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 DPY19L3Q6ZPD9 716 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 MMP21Q8N119 569 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 CHST14Q8NCH0 376 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 ENOPH1Q9UHY7 261 aa15.64■□□□□ 0.1
SDC4-201ENST00000372733 ZNF670-ZNF695F2Z2N8 137 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 FURINP09958 794 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 ARAFP10398 606 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 RHCEP18577 417 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 HYAL2Q12891 473 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 ELOAQ14241 798 aaKnown RBP15.64■□□□□ 0.09
SDC4-201ENST00000372733 GPNMBQ14956 572 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 ZNF461Q8TAF7 563 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 FYTTD1Q96QD9 318 aaKnown RBP15.64■□□□□ 0.09
SDC4-201ENST00000372733 OR51B5Q9H339 312 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 RC3H2Q9HBD1 1191 aaKnown RBP15.64■□□□□ 0.09
SDC4-201ENST00000372733 SEC14L4Q9UDX3 406 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 MAPRE3Q9UPY8 281 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 ANGPT4Q9Y264 503 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 DSPPQ9NZW4 1301 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 TET1Q8NFU7 2136 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 SMIM30A4D0T7 59 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 KPNA5O15131 536 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 FHP07954 510 aa15.64■□□□□ 0.09
SDC4-201ENST00000372733 CHRM5P08912 532 aaPredicted RBP15.64■□□□□ 0.09
SDC4-201ENST00000372733 OPRD1P41143 372 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms