RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MGME1Q9BQP7 344 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 OR8D2Q9GZM6 311 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 USP3Q9Y6I4 520 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 CEP350Q5VT06 3117 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 SPTBP11277 2137 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 H3BQ06 376 aaPredicted RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 RFXAPO00287 272 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 ATXN1LP0C7T5 689 aaKnown RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 CD9P21926 228 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 DDX6P26196 483 aaKnown RBP eCLIP8.74□□□□□ -1.014e-6■■□□□ 13.3
SMARCA1-202ENST00000371122 OMPP47874 163 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 SOX2P48431 317 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 AP2S1P53680 142 aaPredicted RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 DPY19L1Q2PZI1 675 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 PDCD4Q53EL6 469 aaKnown RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 MLIPQ5VWP3 458 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 ANKRD34AQ69YU3 496 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 TMEM107Q6UX40 140 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 LIPIQ6XZB0 460 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 B3GLCTQ6Y288 498 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 FAM92BQ6ZTR7 304 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 CARM1Q86X55 608 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 TMEFF1Q8IYR6 380 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 SLC5A8Q8N695 610 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 OR5D16Q8NGK9 328 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 NEIL2Q969S2 332 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 ATOH8Q96SQ7 321 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 TMEM175Q9BSA9 504 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 WACQ9BTA9 647 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 TPSD1Q9BZJ3 242 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 MRM3Q9HC36 420 aaKnown RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 CENPMQ9NSP4 180 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 PHF24Q9UPV7 400 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 ASB1Q9Y576 335 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 CLCA3PQ9Y6N3 262 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 A0A1B0GTL3 188 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 RBM47A0AV96 593 aaKnown RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 RIIAD1A6NNX1 92 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 M0R3H8 397 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 SKP1P63208 163 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 PRRT3Q5FWE3 981 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 TNFAIP8L3Q5GJ75 292 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 KIAA1614Q5VZ46 1190 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 MZT2AQ6P582 158 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 UGT2A3Q6UWM9 527 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 COMMD6Q7Z4G1 85 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 MRPL10Q7Z7H8 261 aaKnown RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 RAB43Q86YS6 212 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 OR7G3Q8NG95 312 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 PROKR1Q8TCW9 393 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 GATA6Q92908 595 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 UBE2FQ969M7 185 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 TMEM125Q96AQ2 219 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 RHBDF1Q96CC6 855 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 PGAP3Q96FM1 320 aaPredicted RBP8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 HHIPL1Q96JK4 782 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 DPYSL5Q9BPU6 564 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 FUNDC2Q9BWH2 189 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 FAM118AQ9NWS6 357 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 ERVK13-1Q9NX77 482 aa8.74□□□□□ -1.01
SMARCA1-202ENST00000371122 NPIPA5A0A0B4J1W7 369 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 NPIPA7E9PJI5 369 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 ABCB7O75027 752 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 SDC3O75056 442 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 NPIPA8P0DM63 369 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 MATN1P21941 496 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 ARNTP27540 789 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 GNALP38405 381 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 DPP6P42658 865 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 STXBP1P61764 594 aaKnown RBP8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 SLAMF1Q13291 335 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 ZNF267Q14586 743 aaPredicted RBP8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 SMAD2Q15796 467 aaKnown RBP8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 TAZQ16635 292 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 ANKDD1AQ495B1 522 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 SPIN4Q56A73 249 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 FCRLBQ6BAA4 426 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 ZNF773Q6PK81 442 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 CENPSQ8N2Z9 138 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 MINDY1Q8N5J2 469 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 PDCD10Q9BUL8 212 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 REEP4Q9H6H4 257 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 CSNK1G1Q9HCP0 422 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 HRASLS2Q9NWW9 162 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 TAS2R9Q9NYW1 312 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 SNX7Q9UNH6 387 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 WDR45Q9Y484 360 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 OARD1Q9Y530 152 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 RHPN2P1A8MT19 583 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 B3GALT2O43825 422 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 PABPC4LP0CB38 370 aaKnown RBP8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 C1GALT1C1LP0DN25 315 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 AK4P27144 223 aaPredicted RBP8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 SLC6A11P48066 632 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 VSX2P58304 361 aaPredicted RBP8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 LRP8Q14114 963 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 CCSMST1Q4G0I0 132 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 TCEAL5Q5H9L2 206 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 RAB41Q5JT25 222 aa8.73□□□□□ -1.01
SMARCA1-202ENST00000371122 KCTD11Q693B1 232 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms