RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GPR33Q49SQ1 333 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 MAFBQ9Y5Q3 323 aaPredicted RBP12.03□□□□□ -0.48
HCFC1-202ENST00000369984 MSX1P28360 303 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 ADH7P40394 386 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 TLE3Q04726 772 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 NSMAFQ92636 917 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 EFCAB11Q9BUY7 163 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM9Q9P0T7 183 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 ERVK-19Q9WJR5 959 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 TTLL8A6PVC2 850 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 ZBTB48P10074 688 aaPredicted RBP12.03□□□□□ -0.48
HCFC1-202ENST00000369984 SLC6A6P31641 620 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 SNTA1Q13424 505 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF674Q2M3X9 581 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 C12orf40Q86WS4 652 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 RHBDF1Q96CC6 855 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 FCRL5Q96RD9 977 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 WDR6Q9NNW5 1121 aaKnown RBP12.03□□□□□ -0.48
HCFC1-202ENST00000369984 RHCGQ9UBD6 479 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 MGAT4CQ9UBM8 478 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 ROBO1Q9Y6N7 1651 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 M0R2N6 131 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 G6PDP11413 515 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 EDNRBP24530 442 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 OR1E2P47887 323 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 FLT3LGP49771 235 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 SLC39A4Q6P5W5 647 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 XKR5Q6UX68 686 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
HCFC1-202ENST00000369984 ANKRD33BA6NCL7 494 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 IRAK2O43187 625 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 KCNJ13O60928 360 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 EOMESO95936 686 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 UNGP13051 313 aaPredicted RBP12.03□□□□□ -0.48
HCFC1-202ENST00000369984 RPS13P62277 151 aaKnown RBP12.03□□□□□ -0.48
HCFC1-202ENST00000369984 LAPTM4AQ15012 233 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 CHRNA6Q15825 494 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 LCHNA4D1U4 455 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 TOXO94900 526 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 IFNGR1P15260 489 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 NDUFS1P28331 727 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 IRF5Q13568 498 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 DCAF12L1Q5VU92 463 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 LYSMD3Q7Z3D4 306 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 FZD3Q9NPG1 666 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 WTIPA6NIX2 430 aaPredicted RBP12.02□□□□□ -0.48
HCFC1-202ENST00000369984 TSPAN15O95858 294 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 VIPR1P32241 457 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 CDNFQ49AH0 187 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 HMGB4Q8WW32 186 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.48
HCFC1-202ENST00000369984 PLAGL1Q9UM63 463 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 NPIPA7E9PJI5 369 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 C6orf47O95873 294 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 IFNA1P01562 189 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 NPIPA8P0DM63 369 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 BDKRB1P46663 353 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 ARHGAP40Q5TG30 622 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF572Q7Z3I7 529 aaPredicted RBP12.02□□□□□ -0.48
HCFC1-202ENST00000369984 MMAAQ8IVH4 418 aaKnown RBP12.02□□□□□ -0.48
HCFC1-202ENST00000369984 RAD9AQ99638 391 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 MMP27Q9H306 513 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 EXTL2Q9UBQ6 330 aa12.02□□□□□ -0.48
HCFC1-202ENST00000369984 C8orf89P0DMQ9 161 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 CD97P48960 835 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 RIDAP52758 137 aaKnown RBP12.02□□□□□ -0.49
HCFC1-202ENST00000369984 C2orf27AQ580R0 203 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 SLC9B2Q86UD5 537 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 TMEM156Q8N614 296 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 FAM120CQ9NX05 1096 aaKnown RBP12.02□□□□□ -0.49
HCFC1-202ENST00000369984 LAMA4Q16363 1823 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 MTX2O75431 263 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 ELNP15502 786 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 RPL17P18621 184 aaKnown RBP12.02□□□□□ -0.49
HCFC1-202ENST00000369984 BRAT1Q6PJG6 821 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 ZNF367Q7RTV3 350 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 ERMP1Q7Z2K6 904 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 FRZBQ92765 325 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 A0A0U1RQK1 487 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 F5H0A9 414 aaPredicted RBP12.02□□□□□ -0.49
HCFC1-202ENST00000369984 B4GALT2O60909 372 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 RFPL1O75677 317 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 RAD51DO75771 328 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 S1PR1P21453 382 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 RBMXP38159 391 aaKnown RBP12.02□□□□□ -0.49
HCFC1-202ENST00000369984 LASP1Q14847 261 aaKnown RBP12.02□□□□□ -0.49
HCFC1-202ENST00000369984 SFT2D3Q587I9 215 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 TMEM164Q5U3C3 297 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 REEP3Q6NUK4 255 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 NR4A3Q92570 626 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 TAS2R9Q9NYW1 312 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 HCN4Q9Y3Q4 1203 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 PIM1P11309 404 aaPredicted RBP12.02□□□□□ -0.49
HCFC1-202ENST00000369984 PRKACGP22612 351 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 ADH6P28332 368 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 LRIF1Q5T3J3 769 aa12.02□□□□□ -0.49
HCFC1-202ENST00000369984 ZER1Q7Z7L7 766 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms