RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 ACTN3Q08043 901 aaPredicted RBP19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 TGM3Q08188 693 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 TERF2Q15554 542 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 ACER2Q5QJU3 275 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 ZNF595Q8IYB9 648 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 LGI4Q8N135 537 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 ACOT4Q8N9L9 421 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 ROGDIQ9GZN7 287 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 STMN3Q9NZ72 180 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 RNF11Q9Y3C5 154 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 PCDHGA11Q9Y5H2 935 aa19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 COPG1Q9Y678 874 aaKnown RBP19.23■□□□□ 0.67
SMNDC1-201ENST00000369592 DYTNA2CJ06 578 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 RTCAO00442 366 aaKnown RBP19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 MAN1A2O60476 641 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 VPS4BO75351 444 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 PCNAP12004 261 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 HIST1H1TP22492 207 aaPredicted RBP19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 ARG2P78540 354 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 TRAF3Q13114 568 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 LGSNQ5TDP6 509 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 ABHD17BQ5VST6 288 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 ZNF324BQ6AW86 544 aaPredicted RBP19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 SH2D5Q6ZV89 423 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 CHSY3Q70JA7 882 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 LCA5Q86VQ0 697 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 CRLF3Q8IUI8 442 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 APCDD1LQ8NCL9 501 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 OR52B6Q8NGF0 335 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 PHF21BQ96EK2 531 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 ZNF354BQ96LW1 612 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 NSUN5Q96P11 429 aaKnown RBP19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 MAPKAP1Q9BPZ7 522 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 OR51B5Q9H339 312 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 ACTR8Q9H981 624 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 KCNK13Q9HB14 408 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 PRTFDC1Q9NRG1 225 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 VPS4AQ9UN37 437 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 ANGPTL3Q9Y5C1 460 aa19.22■□□□□ 0.67
SMNDC1-201ENST00000369592 TRAV17A0A0B4J275 112 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 OR5H15A6NDH6 313 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 CTNSO60931 367 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 CNPY4Q8N129 248 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 KIF2BQ8N4N8 673 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 OR1N1Q8NGS0 311 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 ACMSDQ8TDX5 336 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 ZNF483Q8TF39 744 aaPredicted RBP19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 CNDP1Q96KN2 507 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 NOL11Q9H8H0 719 aaKnown RBP19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 ANKZF1Q9H8Y5 726 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 TMEM216Q9P0N5 145 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 TEKT2Q9UIF3 430 aa19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 SPTBN1Q01082 2364 aaKnown RBP19.21■□□□□ 0.67
SMNDC1-201ENST00000369592 A0A1B0GTL3 188 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 A8MT66 165 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 A8MUI8 341 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 FOXE1O00358 373 aaPredicted RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 CLDN4O14493 209 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 PLPP1O14494 284 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 CDK2AP1O14519 115 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 ETHE1O95571 254 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 PPP2R1BP30154 601 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 ZNF33BQ06732 778 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 CUL3Q13618 768 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 CPSF6Q16630 551 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 GGTA1PQ4G0N0 100 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 C4orf17Q53FE4 359 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 FCRLBQ6BAA4 426 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 OR4C11Q6IEV9 310 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 MRM1Q6IN84 353 aaKnown RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 BEST3Q8N1M1 668 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 ZCCHC7Q8N3Z6 543 aaKnown RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 FAM47BQ8NA70 645 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 MDS2Q8NDY4 140 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 ARMC2Q8NEN0 867 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 SCYL1Q96KG9 808 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 TAAR6Q96RI8 345 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 MTERF1Q99551 399 aaKnown RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 SORBS1Q9BX66 1292 aaKnown RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 COPS7BQ9H9Q2 264 aaPredicted RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 PSMC3IPQ9P2W1 217 aaPredicted RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 ZNF223Q9UK11 482 aaPredicted RBP19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 PCDHGB6Q9Y5F9 930 aa19.2■□□□□ 0.66
SMNDC1-201ENST00000369592 SMIM24O75264 130 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 SH3BGRLO75368 114 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 CLDN9O95484 217 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 SHBGP04278 402 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 PTX3P26022 381 aaPredicted RBP19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 RPS13P62277 151 aaKnown RBP19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 IGLV3-21P80748 117 aaPredicted RBP19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 MRPL49Q13405 166 aaKnown RBP19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 RCN2Q14257 317 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 ZRSR2Q15696 482 aaKnown RBP19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 INAQ16352 499 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 MEP1AQ16819 746 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 AP5B1Q2VPB7 878 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 TEX35Q5T0J7 233 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 FAM26EQ8N5C1 309 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 GRHL3Q8TE85 626 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms