RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GALNT12Q8IXK2 581 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PROKR2Q8NFJ6 384 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 BHLHE41Q9C0J9 482 aaPredicted RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ACAD8Q9UKU7 415 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 RTCAO00442 366 aaKnown RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 MNDAP41218 407 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 AQP4P55087 323 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 MLF2Q15773 248 aaPredicted RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PPP1R3AQ16821 1122 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 Q7L0L9 218 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 HSD11B1LQ7Z5J1 315 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PACRGLQ8N7B6 248 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 OR52B6Q8NGF0 335 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 FUBP1Q96AE4 644 aaKnown RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 BIRC7Q96CA5 298 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ZNF717Q9BY31 904 aaPredicted RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ARNT2Q9HBZ2 717 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 AMBNQ9NP70 447 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 STOX2Q9P2F5 926 aaPredicted RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 MYH13Q9UKX3 1938 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 MAGEA6P43360 314 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 RPS15AP62244 130 aaKnown RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 OR4D1Q15615 310 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 USP30Q70CQ3 517 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 GAREM2Q75VX8 874 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 MDGA1Q8NFP4 955 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 GPR150Q8NGU9 434 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 TMBIM1Q969X1 311 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 TP53I11O14683 189 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 RCBTB2O95199 551 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 CD9P21926 228 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 CD38P28907 300 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 FOXK1P85037 733 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PLCXD2Q0VAA5 305 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 TMEM173Q86WV6 379 aaPredicted RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PSMA8Q8TAA3 256 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 EDAQ92838 391 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 FATE1Q969F0 183 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 FBXL8Q96CD0 374 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 GAREM1Q9H706 876 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PALMDQ9NP74 551 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 TMEM184CQ9NVA4 438 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 KIAA0355O15063 1070 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 RPP14O95059 124 aaKnown RBP11.12□□□□□ -0.63
SYNE1-204ENST00000367248 CD2P06729 351 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 GABRA3P34903 492 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 GMPRP36959 345 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 TNFRSF4P43489 277 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ECH1Q13011 328 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 GRB7Q14451 532 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 IQCCQ4KMZ1 466 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 ATG14Q6ZNE5 492 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PIANPQ8IYJ0 282 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 COPS4Q9BT78 406 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 APOOQ9BUR5 198 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 PPP4R1LQ9P1A2 415 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 OAZ3Q9UMX2 235 aa11.12□□□□□ -0.63
SYNE1-204ENST00000367248 AURKAO14965 403 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 CH25HO95992 272 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 POU6F2P78424 691 aaPredicted RBP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 MYBPC3Q14896 1274 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 KLHL22Q53GT1 634 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 CHCHD6Q9BRQ6 235 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PELOQ9BRX2 385 aaKnown RBP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 B4GALT7Q9UBV7 327 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 DNAJC15Q9Y5T4 150 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 IRAK3Q9Y616 596 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 F10P00742 488 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 MATN1P21941 496 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 UQCRC2P22695 453 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 HOXD9P28356 352 aaPredicted RBP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PPP1R8Q12972 351 aaKnown RBP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 GRIK2Q13002 908 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PARM1Q6UWI2 310 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 MYRFLQ96LU7 910 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 B3GAT2Q9NPZ5 323 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 SLC39A1Q9NY26 324 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 GPRC5BQ9NZH0 403 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PCTPQ9UKL6 214 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 SPIN1Q9Y657 262 aaPredicted RBP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 ABLIM3O94929 683 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 ACVR2AP27037 513 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 MSX1P28360 303 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 NUDT1P36639 197 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 TMEM35AQ53FP2 167 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 FIGLAQ6QHK4 219 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 NANOGNBQ7Z5D8 188 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 OR52E4Q8NGH9 312 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 BBS10Q8TAM1 723 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.11□□□□□ -0.63
SYNE1-204ENST00000367248 CD200R1Q8TD46 325 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 CMKLR1Q99788 373 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 DAPL1A0PJW8 107 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 C9P02748 559 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 P04436 131 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 NR2C1P13056 603 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 HTR6P50406 440 aa11.11□□□□□ -0.63
SYNE1-204ENST00000367248 SLAMF1Q13291 335 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms