RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 TMEM52Q8NDY8 209 aa22.08■■□□□ 1.13
SHC1-201ENST00000366442 OR7G3Q8NG95 312 aa22.08■■□□□ 1.13
SHC1-201ENST00000366442 SLC44A1Q8WWI5 657 aa22.08■■□□□ 1.13
SHC1-201ENST00000366442 IFT81Q8WYA0 676 aa22.08■■□□□ 1.13
SHC1-201ENST00000366442 ISL2Q96A47 359 aa22.08■■□□□ 1.13
SHC1-201ENST00000366442 GPR78Q96P69 363 aa22.08■■□□□ 1.13
SHC1-201ENST00000366442 TRIM45Q9H8W5 580 aaPredicted RBP22.08■■□□□ 1.13
SHC1-201ENST00000366442 ANKRD10Q9NXR5 420 aa22.08■■□□□ 1.13
SHC1-201ENST00000366442 DIDO1Q9BTC0 2240 aaKnown RBP22.08■■□□□ 1.13
SHC1-201ENST00000366442 A8MUA0 341 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 LRRTM2O43300 516 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 NEURL1O76050 574 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 MYO1DO94832 1006 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 SCELO95171 688 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 ACSL3O95573 720 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 GFAPP14136 432 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 MST1P26927 711 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 TPP2P29144 1249 aaPredicted RBP22.07■■□□□ 1.12
SHC1-201ENST00000366442 ECHS1P30084 290 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 TRHRP34981 398 aaPredicted RBP22.07■■□□□ 1.12
SHC1-201ENST00000366442 CLCN2P51788 898 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 PER3P56645 1201 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 OC90Q02509 493 aaPredicted RBP22.07■■□□□ 1.12
SHC1-201ENST00000366442 PFKFB4Q16877 469 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 METTL2BQ6P1Q9 378 aaKnown RBP22.07■■□□□ 1.12
SHC1-201ENST00000366442 CHSY3Q70JA7 882 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 TEX9Q8N6V9 391 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 TMEM178AQ8NBL3 297 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 CMTM7Q96FZ5 175 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 DEFB126Q9BYW3 111 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 ADAP2Q9NPF8 381 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 KCMF1Q9P0J7 381 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 LRFN1Q9P244 771 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 TSC22D4Q9Y3Q8 395 aa22.07■■□□□ 1.12
SHC1-201ENST00000366442 A0A1B0GUH1 482 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 TGFBR3LH3BV60 316 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 UGDHO60701 494 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 CTNSO60931 367 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 INHBAP08476 426 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 PCNAP12004 261 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 ATP5A1P25705 553 aaKnown RBP22.06■■□□□ 1.12
SHC1-201ENST00000366442 EEF1DP29692 281 aaKnown RBP22.06■■□□□ 1.12
SHC1-201ENST00000366442 MAGEA12P43365 314 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 CYB561P49447 251 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 KCNK10P57789 538 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 PCBP2Q15366 365 aaKnown RBP eCLIP22.06■■□□□ 1.123e-7■■■■□ 20.5
SHC1-201ENST00000366442 LIPJQ5W064 366 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 GFRALQ6UXV0 394 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 ZNF793Q6ZN11 406 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 MAMDC2Q7Z304 686 aaPredicted RBP22.06■■□□□ 1.12
SHC1-201ENST00000366442 VMP1Q96GC9 406 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 CSF3RQ99062 836 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 PNO1Q9NRX1 252 aaKnown RBP22.06■■□□□ 1.12
SHC1-201ENST00000366442 ANGPTL3Q9Y5C1 460 aa22.06■■□□□ 1.12
SHC1-201ENST00000366442 TNPO3Q9Y5L0 923 aaKnown RBP22.06■■□□□ 1.12
SHC1-201ENST00000366442 A1L4Q6 167 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 ASPDHA6ND91 283 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 FCHO1O14526 889 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 SP1P08047 785 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 HIST1H1TP22492 207 aaPredicted RBP22.05■■□□□ 1.12
SHC1-201ENST00000366442 PIK3CBP42338 1070 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 SERPINB9P50453 376 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 GPR143P51810 404 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 PMP22Q01453 160 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 ELAVL1Q15717 326 aaKnown RBP22.05■■□□□ 1.12
SHC1-201ENST00000366442 ZNF468Q5VIY5 522 aaPredicted RBP22.05■■□□□ 1.12
SHC1-201ENST00000366442 KHDRBS2Q5VWX1 349 aaKnown RBP22.05■■□□□ 1.12
SHC1-201ENST00000366442 SLC25A25Q6KCM7 469 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 TAOK1Q7L7X3 1001 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 ACOT4Q8N9L9 421 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 HES7Q9BYE0 225 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 VPS11Q9H270 941 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 KLHL1Q9NR64 748 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 SEC14L3Q9UDX4 400 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 IKBKGQ9Y6K9 419 aa22.05■■□□□ 1.12
SHC1-201ENST00000366442 TRBV11-1A0A0K0K1C0 115 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 SLC25A12O75746 678 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 UNC5CO95185 931 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 CLDN1O95832 211 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 TGFB1P01137 390 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 PIK3CGP48736 1102 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 ST13P50502 369 aaKnown RBP22.04■■□□□ 1.12
SHC1-201ENST00000366442 HLCSP50747 726 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 ARFIP1P53367 373 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.04■■□□□ 1.12
SHC1-201ENST00000366442 AP5B1Q2VPB7 878 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 TECRLQ5HYJ1 363 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 DEPDC1Q5TB30 811 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 CLNKQ7Z7G1 428 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 TMEM132CQ8N3T6 1108 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 FAM98AQ8NCA5 519 aaKnown RBP22.04■■□□□ 1.12
SHC1-201ENST00000366442 C7orf57Q8NEG2 295 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 RELTQ969Z4 430 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 PAFAH2Q99487 392 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 VTI1BQ9UEU0 232 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 PCDHGA11Q9Y5H2 935 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 SPACA6W5XKT8 324 aa22.04■■□□□ 1.12
SHC1-201ENST00000366442 H0YIV9 168 aa22.03■■□□□ 1.12
SHC1-201ENST00000366442 MLYCDO95822 493 aa22.03■■□□□ 1.12
SHC1-201ENST00000366442 CNTFP26441 200 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms