RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 PRAMEF2O60811 474 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 MYO1DO94832 1006 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 RBP1P09455 135 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 RNF224P0DH78 156 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 COL6A2P12110 1019 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 HIST1H1TP22492 207 aaPredicted RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 ATP5A1P25705 553 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 SSR2P43308 183 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 PIK3CGP48736 1102 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 SLC13A2Q13183 592 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 TUBA3CQ13748 450 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 ELOAQ14241 798 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 TMEM35AQ53FP2 167 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 CROCCQ5TZA2 2017 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 KHDRBS2Q5VWX1 349 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 LIPJQ5W064 366 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 METTL2BQ6P1Q9 378 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 TUBA3EQ6PEY2 450 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 TRMT10CQ7L0Y3 403 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 ZNF595Q8IYB9 648 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 ACOT4Q8N9L9 421 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 APCDD1LQ8NCL9 501 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 MDS2Q8NDY4 140 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 SRFBP1Q8NEF9 429 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 SUN3Q8TAQ9 357 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 FAR1Q8WVX9 515 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 PHF21BQ96EK2 531 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 CMTM7Q96FZ5 175 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 NSUN5Q96P11 429 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 SIGLEC12Q96PQ1 595 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 MTERF1Q99551 399 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 MAPKAP1Q9BPZ7 522 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 SLX1AQ9BQ83 275 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 TBCDQ9BTW9 1192 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 SORBS1Q9BX66 1292 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 ROGDIQ9GZN7 287 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 OR51B5Q9H339 312 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 IPPKQ9H8X2 491 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 LYRM4Q9HD34 91 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 ADAP2Q9NPF8 381 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 PNO1Q9NRX1 252 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 OLAHQ9NV23 265 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 KCMF1Q9P0J7 381 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 ADGRE2Q9UHX3 823 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 PCTPQ9UKL6 214 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 TMCO1Q9UM00 188 aa9.69□□□□□ -0.86
YBX3-203ENST00000366286 TNPO3Q9Y5L0 923 aaKnown RBP9.69□□□□□ -0.86
YBX3-203ENST00000366286 TRBV11-1A0A0K0K1C0 115 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 H0YIV9 168 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 STX16-NPEPL1H3BU86 382 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 CLDN4O14493 209 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 PLPP1O14494 284 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 OR7A17O14581 309 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 STX16O14662 325 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 SMIM24O75264 130 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 SCELO95171 688 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 SNRPAP09012 282 aaKnown RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 EDN3P14138 238 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 TPP2P29144 1249 aaPredicted RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 CD96P40200 585 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 ARL1P40616 181 aaPredicted RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 PIK3CBP42338 1070 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 TDGF1P3P51864 188 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 RAP1GDS1P52306 607 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 RPS13P62277 151 aaKnown RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 PHEXP78562 749 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 PMP22Q01453 160 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 RCN2Q14257 317 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 TERF2Q15554 542 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 OR1C1Q15619 314 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 CPSF6Q16630 551 aaKnown RBP eCLIP9.68□□□□□ -0.86
YBX3-203ENST00000366286 AP5B1Q2VPB7 878 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 ZNF766Q5HY98 468 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 DEPDC1Q5TB30 811 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 ZNF324BQ6AW86 544 aaPredicted RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 ADGRD1Q6QNK2 874 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 LGI4Q8N135 537 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 L3MBTL4Q8NA19 623 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 B3GNT7Q8NFL0 401 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 OR52B6Q8NGF0 335 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 SSC4DQ8WTU2 575 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 NR4A3Q92570 626 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 REPS1Q96D71 796 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 CDK15Q96Q40 435 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 UTP23Q9BRU9 249 aaKnown RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 HES7Q9BYE0 225 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 TXLNGYQ9BZA5 131 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 MRPL46Q9H2W6 279 aaKnown RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 EPB41L4BQ9H329 900 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 CDCP1Q9H5V8 836 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 NOL11Q9H8H0 719 aaKnown RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 ZBTB26Q9HCK0 441 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 ZNF223Q9UK11 482 aaPredicted RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 RNF11Q9Y3C5 154 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 TSC22D4Q9Y3Q8 395 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 PCDHGA11Q9Y5H2 935 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 EXPH5Q8NEV8 1989 aa9.68□□□□□ -0.86
YBX3-203ENST00000366286 USP9XQ93008 2570 aaPredicted RBP9.68□□□□□ -0.86
YBX3-203ENST00000366286 MYOCOSA0A1B0GUC4 107 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms