RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ADAP2Q9NPF8 381 aa13.35□□□□□ -0.27
COL6A1-201ENST00000361866 MRPS23Q9Y3D9 190 aaKnown RBP13.35□□□□□ -0.27
COL6A1-201ENST00000361866 J3KTA2 159 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 MID1O15344 667 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 KLHL18O94889 574 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 CBSLP0DN79 551 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 TIA1P31483 386 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 TNFSF8P32971 234 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 CBSP35520 551 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 MAP2K3P46734 347 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 KEAP1Q14145 624 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 RGNQ15493 299 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 INAVAQ3KP66 663 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PRAMEF13Q5VWM6 474 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GTF2IRD2BQ6EKJ0 949 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 ARMC6Q6NXE6 501 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF613Q6PF04 617 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GTF2IRD2Q86UP8 949 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 FAM129CQ86XR2 697 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 NEIL3Q8TAT5 605 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GPR151Q8TDV0 419 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 CLMPQ9H6B4 373 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 UGT2A1Q9Y4X1 527 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 F5P12259 2224 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 UBE2QL1A1L167 161 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 A6NIN4 97 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 C12orf71A8MTZ7 269 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 M0QZQ0 153 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 POP7O75817 140 aaKnown RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GABARAPO95166 117 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 STAT5AP42229 794 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 OXA1LQ15070 435 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 RPS26P11Q5JNZ5 115 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 OR51G2Q8NGK0 314 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 SORCS1Q8WY21 1168 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GGHQ92820 318 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PTHP01270 115 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PCCBP05166 539 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 SMSP52788 366 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GSTM4Q03013 218 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PTGES3Q15185 160 aaKnown RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 CHMP1BQ7LBR1 199 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PARGQ86W56 976 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 CADM2Q8N3J6 435 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 KCT2Q8NC54 265 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 ZCCHC10Q8TBK6 192 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 SNX33Q8WV41 574 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 NEURL2Q9BR09 285 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 GSDMCQ9BYG8 508 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 RSPH9Q9H1X1 276 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 KCNN2Q9H2S1 579 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 FBXO9Q9UK97 447 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 A0A1W2PQ09 198 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 IRGMA1A4Y4 181 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 OAZ2O95190 189 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 IL7P13232 177 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 HOXD9P28356 352 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 PIN1Q13526 163 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 AGAP6Q5VW22 663 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 C22orf39Q6P5X5 142 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 ZNF431Q8TF32 576 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 CIDECQ96AQ7 238 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 AGAP4Q96P64 663 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 RTP3Q9BQQ7 232 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 TNFRSF10DQ9UBN6 386 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 EXTL2Q9UBQ6 330 aa13.34□□□□□ -0.27
COL6A1-201ENST00000361866 ZFR2Q9UPR6 939 aaKnown RBP13.34□□□□□ -0.27
COL6A1-201ENST00000361866 TTC3P53804 2025 aa13.33□□□□□ -0.27
COL6A1-201ENST00000361866 KIAA0100Q14667 2235 aaKnown RBP13.33□□□□□ -0.27
COL6A1-201ENST00000361866 NPIPB15A6NHN6 443 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 H7BY64 318 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 PCDH17O14917 1159 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 AKAP8O43823 692 aaKnown RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 PCDHGA12O60330 932 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 OR12D1P0DN82 309 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 CCND3P30281 292 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 TLX1P31314 330 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 CLK3P49761 638 aaKnown RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 AP2S1P53680 142 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 PPP2R2BQ00005 443 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 LMAN2Q12907 356 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 AGAP7PQ5VUJ5 663 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 CHPFQ8IZ52 775 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 DOK4Q8TEW6 326 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 PRAP1Q96NZ9 151 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 CDH7Q9ULB5 785 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 CD8B2A6NJW9 211 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 WWP2O00308 870 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 INPPL1O15357 1258 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 HLA-DPB1P04440 258 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 C8AP07357 584 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms