RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 F8A1P23610 371 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 BUD31P41223 144 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 FOLR3P41439 243 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 MAT1AQ00266 395 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 MAD2L1Q13257 205 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 BIKQ13323 160 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 RUNX2Q13950 521 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 SPDYAQ5MJ70 313 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 QSOX2Q6ZRP7 698 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 GPR180Q86V85 440 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 ZC3H7AQ8IWR0 971 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 ZNF595Q8IYB9 648 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 C1orf52Q8N6N3 182 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 OR5T3Q8NGG3 340 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 AGR3Q8TD06 166 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 HBEGFQ99075 208 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 YIPF2Q9BWQ6 316 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 ACTL8Q9H568 366 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 MEAF6Q9HAF1 191 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 KCMF1Q9P0J7 381 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 HCN3Q9P1Z3 774 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 RAXQ9Y2V3 346 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 MMACHCQ9Y4U1 282 aa13.05□□□□□ -0.32
NSMCE1-201ENST00000361439 A0A0G2JN53 185 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 ZNF891A8MT65 544 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 TAF4O00268 1085 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 CYR61O00622 381 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 PROM1O43490 865 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 CNOT3O75175 753 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 EEDO75530 441 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 CREG1O75629 220 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 B3GALT4O96024 378 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 KLK1P06870 262 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 FAM58BPP0C7Q3 252 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 MAPK1P28482 360 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 PPP2R1BP30154 601 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 MDH1P40925 334 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 MAPK12P53778 367 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 HSD17B7P56937 341 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 TLE3Q04726 772 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 KLC1Q07866 573 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 SLAMF1Q13291 335 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 KIAA0040Q15053 153 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 NR6A1Q15406 480 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 ATP6AP1LQ52LC2 224 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 VWA2Q5GFL6 755 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 WDR75Q8IWA0 830 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 PLPP5Q8NEB5 264 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 STARD8Q92502 1023 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 TANKQ92844 425 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 APIPQ96GX9 242 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 PEX11GQ96HA9 241 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 NAF1Q96HR8 494 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 FCRL1Q96LA6 429 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 SIKE1Q9BRV8 207 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 LRTM1Q9HBL6 345 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 LANCL2Q9NS86 450 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 PNPOQ9NVS9 261 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 IL17BQ9UHF5 180 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 PTRH2Q9Y3E5 179 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 ASB4Q9Y574 426 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 FER1L5A0AVI2 2057 aa13.04□□□□□ -0.32
NSMCE1-201ENST00000361439 A0A1W2PQ72 361 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 IDSB3KWA1 339 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 TMPRSS11DO60235 418 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 SEC22BO75396 215 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 HEXBP07686 556 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 DRD2P14416 443 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 CPN2P22792 545 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 MMP11P24347 488 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 TIA1P31483 386 aaKnown RBP eCLIP13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 TNFRSF17Q02223 184 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 BTKQ06187 659 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 UGT8Q16880 541 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 NOXRED1Q6NXP6 359 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 SCIMPQ6UWF3 145 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 CCDC81Q6ZN84 652 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 IKBIPQ70UQ0 350 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 VASH2Q86V25 355 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 RAB43Q86YS6 212 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 OR2T11Q8NH01 316 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 SNRNP27Q8WVK2 155 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 THAP4Q8WY91 577 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 RNF31Q96EP0 1072 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 MAPKAP1Q9BPZ7 522 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 FAIM2Q9BWQ8 316 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 SORBS1Q9BX66 1292 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 WDR41Q9HAD4 459 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 DMXL2Q8TDJ6 3036 aa13.03□□□□□ -0.32
NSMCE1-201ENST00000361439 GNG14A0A1W2PPG7 69 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 C1orf226A1L170 272 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms