RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CHCHD4Q8N4Q1 142 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC15A4Q8N697 577 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 MRIQ9BWK5 157 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 RETREG1Q9H6L5 497 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 PNO1Q9NRX1 252 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 OXSMQ9NWU1 459 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CD6P30203 668 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 MAGEB1P43366 347 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CXCL17Q6UXB2 119 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 LINC00116Q8NCU8 138 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 BEST4Q8NFU0 473 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CPXM1Q96SM3 734 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 MTERF1Q99551 399 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM35AQ53FP2 167 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 PELOQ9BRX2 385 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CD300AQ9UGN4 299 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 SELPP16109 830 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 IL10RBQ08334 325 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 POU4F2Q12837 409 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 ADAMTS13Q76LX8 1427 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 PTPRUQ92729 1446 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 COPS5Q92905 334 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CASD1Q96PB1 797 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CGREF1Q99674 301 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC6A16Q9GZN6 736 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 ATG5Q9H1Y0 275 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CENPMQ9NSP4 180 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 GOT2P00505 430 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CTSOP43234 321 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 NANOS1Q8WY41 292 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM41AQ96HV5 264 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CPNE5Q9HCH3 593 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 RFPL3O75679 317 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 SNCGO76070 127 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 DIRAS1O95057 198 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 GCDHQ92947 438 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 BIRC7Q96CA5 298 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 ZDHHC12Q96GR4 267 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CENPOQ9BU64 300 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 RNF19AQ9NV58 838 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 SULT1C2O00338 296 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 DNAJB1P25685 340 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 GSK3BP49841 420 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 DGKEP52429 567 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 ACTA2P62736 377 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 ACTG2P63267 376 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM151AQ8N4L1 468 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CNIH3Q8TBE1 160 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CMTM7Q96FZ5 175 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 ABCG5Q9H222 651 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 FBRSQ9HAH7 460 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 KCNIP1Q9NZI2 227 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
SRGAP3-201ENST00000360413 INPPL1O15357 1258 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 KCTD18Q6PI47 426 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 VITQ6UXI7 678 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 DTX3Q8N9I9 347 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 JOSD2Q8TAC2 188 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 SEC61A2Q9H9S3 476 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 RRAGCQ9HB90 399 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 FAM86C1Q9NVL1 165 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 EXOSC1Q9Y3B2 195 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 SAP18O00422 153 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 GOSR2O14653 212 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 KIAA0513O60268 411 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 B4GALT4O60513 344 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 KIAA0907Q7Z7F0 614 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC9B2Q86UD5 537 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CFAP52Q8N1V2 620 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 OR10T2Q8NGX3 314 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 MUS81Q96NY9 551 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 POU2F3Q9UKI9 436 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 MYOCOSA0A1B0GUC4 107 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 RASAL1O95294 804 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 PRKACGP22612 351 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 MMP8P22894 467 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CTHP32929 405 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 ARRB1P49407 418 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 HNRNPFP52597 415 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 HORMAD2Q8N7B1 307 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 LRRC57Q8N9N7 239 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 NAA11Q9BSU3 229 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 SDCBP2Q9H190 292 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 WDR26Q9H7D7 661 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 SETD1AO15047 1707 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 CDK1P06493 297 aa12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 RRAS2P62070 204 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-201ENST00000360413 NTRK2Q16620 822 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms