RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 OR12D1P0DN82 309 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 TYRP1P17643 537 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 DHPSP49366 369 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-203ENST00000359759 GINS1Q14691 196 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 SGCAQ16586 387 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 TIGD5Q53EQ6 642 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 CHADLQ6NUI6 762 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 PTF1AQ7RTS3 328 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 ZFP41Q8N8Y5 198 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 NELFAQ9H3P2 528 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 RBBP9O75884 186 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 AMY2BP19961 511 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 KCNJ11Q14654 390 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 MBLAC2Q68D91 279 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 KRTCAP2Q8N6L1 136 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 CPT1CQ8TCG5 803 aa15.47■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF850A8MQ14 1090 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 HTR2AP28223 471 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 LHFPL3Q86UP9 236 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 CLDN19Q8N6F1 224 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 SECISBP2Q96T21 854 aaKnown RBP15.46■□□□□ 0.07
COL18A1-203ENST00000359759 GMEB2Q9UKD1 530 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 A0A1W2PP18 115 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 RBM47A0AV96 593 aaKnown RBP15.46■□□□□ 0.07
COL18A1-203ENST00000359759 BRINP1O60477 761 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 PIK3CBP42338 1070 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 NIPAL4Q0D2K0 466 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 ABRAXAS2Q15018 415 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 ZNF367Q7RTV3 350 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 ZC3HC1Q86WB0 502 aaKnown RBP15.46■□□□□ 0.07
COL18A1-203ENST00000359759 EGFL6Q8IUX8 553 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 OR56A1Q8NGH5 318 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 CD99L2Q8TCZ2 262 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 ELP5Q8TE02 316 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 LMX1AQ8TE12 382 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 DOK4Q8TEW6 326 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 SLC5A11Q8WWX8 675 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 TTYH3Q9C0H2 523 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 PIGVQ9NUD9 493 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 PAK1IP1Q9NWT1 392 aaPredicted RBP15.46■□□□□ 0.07
COL18A1-203ENST00000359759 MYEF2Q9P2K5 600 aaKnown RBP15.46■□□□□ 0.07
COL18A1-203ENST00000359759 DHDHQ9UQ10 334 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 GOSR2O14653 212 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 FOSL1P15407 271 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 RAB5BP61020 215 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 EXOC3L2Q2M3D2 409 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 LINC00471Q8N535 108 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 KCNN1Q92952 543 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 HCN4Q9Y3Q4 1203 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 A0A0U1RQK1 487 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 PCDH17O14917 1159 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 MAS1P04201 325 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 H2BFMP0C1H6 154 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 PREPP48147 710 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 CAV3P56539 151 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 GLT8D1Q68CQ7 371 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 FBRSL1Q9HCM7 1045 aaKnown RBP15.46■□□□□ 0.07
COL18A1-203ENST00000359759 CDC14AQ9UNH5 594 aa15.46■□□□□ 0.07
COL18A1-203ENST00000359759 RAD51DO75771 328 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 POP7O75817 140 aaKnown RBP15.46■□□□□ 0.06
COL18A1-203ENST00000359759 BCAS2O75934 225 aaPredicted RBP15.46■□□□□ 0.06
COL18A1-203ENST00000359759 AHSA1O95433 338 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF181Q2M3W8 571 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 PIGGQ5H8A4 983 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 GALNT10Q86SR1 603 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 STK35Q8TDR2 534 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF516Q92618 1163 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 MCHR1Q99705 422 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 TUBA1CQ9BQE3 449 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 TBCCD1Q9NVR7 557 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 PIK3C2BO00750 1634 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 UPK3BL1B0FP48 263 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 UPK3BL2E5RIL1 263 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 SOCS2O14508 198 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 OR2B3O76000 313 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 DNASE1P24855 282 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 GSTM2P28161 218 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF45Q02386 682 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 PTCHD3Q3KNS1 767 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 FAM217AQ8IXS0 508 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 TMED5Q9Y3A6 229 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 B3GALT1Q9Y5Z6 326 aa15.46■□□□□ 0.06
COL18A1-203ENST00000359759 ARVCFO00192 962 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 AOC1P19801 751 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 GKP32189 559 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 RPL26P61254 145 aaKnown RBP15.45■□□□□ 0.06
COL18A1-203ENST00000359759 ECH1Q13011 328 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 FLYWCH1Q4VC44 716 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 TMPRSS12Q86WS5 348 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 KIF18BQ86Y91 864 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 THAP4Q8WY91 577 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 C17orf62Q9BQA9 187 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 MAP2K3P46734 347 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 GPR33Q49SQ1 333 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 BEST3Q8N1M1 668 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 CD93Q9NPY3 652 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 SACM1LQ9NTJ5 587 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 SEC14L4Q9UDX3 406 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 EPHA6Q9UF33 1036 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms