RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 CCDC116Q8IYX3 515 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 PXYLP1Q8TE99 480 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 RBP7Q96R05 134 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 TMEM248Q9NWD8 314 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 PCDHGB6Q9Y5F9 930 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 IFNA2P01563 188 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 CKMT1AP12532 417 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 PPP1R3AQ16821 1122 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 SFT2D3Q587I9 215 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 TMEM110Q86TL2 294 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 DCUN1D3Q8IWE4 304 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 THAP3Q8WTV1 239 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-202ENST00000359082 GPR22Q99680 433 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 PRTFDC1Q9NRG1 225 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 A0A0D9SEW6 157 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 SCO2O43819 266 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 CNTN5O94779 1100 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 CSF2P04141 144 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 GRPRP30550 384 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 SNU13P55769 128 aaKnown RBP17.71■□□□□ 0.43
SHANK1-202ENST00000359082 DLK2Q6UY11 383 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 OR13C3Q8NGS6 347 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 SCGB1C1Q8TD33 95 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 HCN2Q9UL51 889 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 MGAT4BQ9UQ53 548 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 FLRT2O43155 660 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 RP2O75695 350 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 H2BFMP0C1H6 154 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 ANXA3P12429 323 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 EMX2Q04743 252 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 C6orf183Q5T699 404 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 C2CD4AQ8NCU7 369 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-202ENST00000359082 MINDY3Q9H8M7 445 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 STC1P52823 247 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 ITPRIPL2Q3MIP1 535 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 DENND1AQ8TEH3 1009 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 CDH10Q9Y6N8 788 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 TCRBV21S2A2A0A5A6 115 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 PDYNP01213 254 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 JMJD7P0C870 316 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 PAFAH1B3Q15102 231 aaKnown RBP17.7■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF792Q3KQV3 632 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF404Q494X3 552 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 NRROSQ86YC3 692 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 CNIH3Q8TBE1 160 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF675Q8TD23 568 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 HSPA12BQ96MM6 686 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 MRM3Q9HC36 420 aaKnown RBP17.7■□□□□ 0.42
SHANK1-202ENST00000359082 UNC119BA6NIH7 251 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 H7BY64 318 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 TMEM115Q12893 351 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-202ENST00000359082 TGFBIQ15582 683 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 TMEM68Q96MH6 324 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 PRAP1Q96NZ9 151 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 PCDHB16Q9NRJ7 776 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 HCN4Q9Y3Q4 1203 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 GSTT2P0CG29 244 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 DCKP27707 260 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF763Q0D2J5 394 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 GRHL2Q6ISB3 625 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 TTLL10Q6ZVT0 673 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 CMASQ8NFW8 434 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-202ENST00000359082 FN3KQ9H479 309 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 REEP4Q9H6H4 257 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 RPS3P23396 243 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHANK1-202ENST00000359082 SLC11A1P49279 550 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 REEP3Q6NUK4 255 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 KRTCAP2Q8N6L1 136 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 ELP5Q8TE02 316 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 NR4A3Q92570 626 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-202ENST00000359082 SARDHQ9UL12 918 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 CYP8B1Q9UNU6 501 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 H0YJX3 145 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 CLIC3O95833 236 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 THAP4Q8WY91 577 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 KIAA1191Q96A73 305 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 TAS2R9Q9NYW1 312 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 EXTL2Q9UBQ6 330 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 KCNIP3Q9Y2W7 256 aa17.7■□□□□ 0.42
SHANK1-202ENST00000359082 ABCB7O75027 752 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 GAS6Q14393 721 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 LRIT3Q3SXY7 679 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 LRIF1Q5T3J3 769 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 BOLLQ8N9W6 283 aaKnown RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 OR4K14Q8NGD5 310 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 TEX264Q9Y6I9 313 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 CCL5P13501 91 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 RBMXP38159 391 aaKnown RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 ABHD18Q0P651 414 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 AVL9Q8NBF6 648 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 TBC1D15Q8TC07 691 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 BCO2Q9BYV7 579 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 INSL5Q9Y5Q6 135 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 MED1Q15648 1581 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 SLC9A3P48764 834 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 ST3GAL4Q11206 333 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 ECH1Q13011 328 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms