RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 YES1P07947 543 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 IFNA8P32881 189 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 RPS19P39019 145 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 HTR2BP41595 481 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MAPK8P45983 427 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 POLR2LP62875 67 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SLAMF1Q13291 335 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 HEPACAMQ14CZ8 416 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SLC5A12Q1EHB4 618 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PPP2R2DQ66LE6 453 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SDE2Q6IQ49 451 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CHST9Q7L1S5 443 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF367Q7RTV3 350 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TIGD4Q8IY51 512 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 DCAF4L2Q8NA75 395 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CHST14Q8NCH0 376 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 OR7G3Q8NG95 312 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 C9orf43Q8TAL5 461 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SUN5Q8TC36 379 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SLC9A6Q92581 669 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TESCQ96BS2 214 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 AP2M1Q96CW1 435 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 RNFT2Q96EX2 444 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 FRMD6Q96NE9 622 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 IL17FQ96PD4 163 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PIP5K1AQ99755 562 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SLC12A9Q9BXP2 914 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 UCK2Q9BZX2 261 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 RACGAP1Q9H0H5 632 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ANKHQ9HCJ1 492 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 NKIRAS2Q9NYR9 191 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 NLKQ9UBE8 527 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GULP1Q9UBP9 304 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MBD1Q9UIS9 605 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CLEC4EQ9ULY5 219 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ERVW-1Q9UQF0 538 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CCL27Q9Y4X3 112 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PSME4Q14997 1843 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PLXNA1Q9UIW2 1896 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PRAMEF33A0A0G2JMD5 474 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 A0A1W2PRU2 124 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM202A6NGA9 273 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GLOD5A6NK44 160 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SMLR1H3BR10 107 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PRAMEF10O60809 474 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 AOC2O75106 756 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PDE9AO76083 593 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ELFN1P0C7U0 828 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SLC2A2P11168 524 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CHMP24386 653 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PPP2R1BP30154 601 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ACLYP53396 1101 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CRB2Q5IJ48 1285 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 LCN1P1Q5VSP4 162 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 RAET1GQ6H3X3 334 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TMIGD1Q6UXZ0 262 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MACC1Q6ZN28 852 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CALHM3Q86XJ0 350 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 WDR48Q8TAF3 677 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 APH1BQ8WW43 257 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF566Q969W8 418 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 COL26A1Q96A83 441 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 REPS1Q96D71 796 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 BBS4Q96RK4 519 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM45AQ9NWC5 275 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MUTYHQ9UIF7 546 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 Q9Y3F1 56 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CKAP5Q14008 2032 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ARHGEF33A8MVX0 844 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 SLC30A4O14863 429 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 GPX5O75715 221 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ETHE1O95571 254 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 CYP17A1P05093 508 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 RPLP2P05387 115 aaKnown RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 IL3P08700 152 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 IL7P13232 177 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 GPX2P18283 190 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 TIA1P31483 386 aaKnown RBP eCLIP6.29□□□□□ -1.46e-10■■■■□ 20.6
CSDE1-203ENST00000358528 CSNK1DP48730 415 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 MAPK12P53778 367 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 AP1S2P56377 157 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 RAB8AP61006 207 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 KCNJ10P78508 379 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 CSTF1Q05048 431 aaKnown RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 PIN1Q13526 163 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 CBX2Q14781 532 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 WSCD2Q2TBF2 565 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 BTBD16Q32M84 506 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 MZT2BQ6NZ67 158 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 MMP21Q8N119 569 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 FATE1Q969F0 183 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 NEIL2Q969S2 332 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 TADA1Q96BN2 335 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM80Q96HE8 168 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 EPYCQ99645 322 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 HDHD5Q9BXW7 423 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 REEP4Q9H6H4 257 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ANKRA2Q9H9E1 313 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 KCNK12Q9HB15 430 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms