RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 WDR20Q8TBZ3 569 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 TMEM143Q96AN5 459 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 PPP3R2Q96LZ3 170 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 SPHK1Q9NYA1 384 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 SIX4Q9UIU6 781 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 ZNF225Q9UK10 706 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 D6RAR5 112 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 CCNDBP1O95273 360 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 S100A9P06702 114 aaKnown RBP15.09■□□□□ 0.01
RTN3-205ENST00000356000 ODC1P11926 461 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 AKT1P31749 480 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 ATP5C1P36542 298 aaKnown RBP15.09■□□□□ 0.01
RTN3-205ENST00000356000 EVX1P49640 407 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 EEF1A1P68104 462 aaKnown RBP15.09■□□□□ 0.01
RTN3-205ENST00000356000 EEF1A2Q05639 463 aaKnown RBP15.09■□□□□ 0.01
RTN3-205ENST00000356000 LGALS3BPQ08380 585 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 OR4D1Q15615 310 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 MAPKAPK3Q16644 382 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 EEF1A1P5Q5VTE0 462 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 WASH2PQ6VEQ5 465 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 ZDHHC17Q8IUH5 632 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 C10orf111Q8N326 155 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 C12orf45Q8N5I9 185 aaPredicted RBP15.09■□□□□ 0.01
RTN3-205ENST00000356000 ARMC5Q96C12 935 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 TMEM134Q9H6X4 195 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 PCDHGA2Q9Y5H1 932 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 NPTNQ9Y639 398 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 TRBV5-3A0A0A0MS03 114 aa15.08■□□□□ 0
RTN3-205ENST00000356000 A0A1B0GTQ1 180 aa15.08■□□□□ 0
RTN3-205ENST00000356000 TTLL8A6PVC2 850 aa15.08■□□□□ 0
RTN3-205ENST00000356000 GDF11O95390 407 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ESR1P03372 595 aa15.08■□□□□ 0
RTN3-205ENST00000356000 PRF1P14222 555 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ERCC2P18074 760 aa15.08■□□□□ 0
RTN3-205ENST00000356000 STAT5BP51692 787 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ITGA1P56199 1179 aa15.08■□□□□ 0
RTN3-205ENST00000356000 PURAQ00577 322 aaKnown RBP15.08■□□□□ 0
RTN3-205ENST00000356000 DEFA5Q01523 94 aa15.08■□□□□ 0
RTN3-205ENST00000356000 SERTAD2Q14140 314 aa15.08■□□□□ 0
RTN3-205ENST00000356000 GOLGA7BQ2TAP0 167 aa15.08■□□□□ 0
RTN3-205ENST00000356000 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
RTN3-205ENST00000356000 DMBX1Q8NFW5 382 aa15.08■□□□□ 0
RTN3-205ENST00000356000 MOSPD2Q8NHP6 518 aa15.08■□□□□ 0
RTN3-205ENST00000356000 COQ8AQ8NI60 647 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ATOH8Q96SQ7 321 aa15.08■□□□□ 0
RTN3-205ENST00000356000 TBL1YQ9BQ87 522 aa15.08■□□□□ 0
RTN3-205ENST00000356000 GKN1Q9NS71 199 aa15.08■□□□□ 0
RTN3-205ENST00000356000 FAM198AQ9UFP1 575 aa15.08■□□□□ 0
RTN3-205ENST00000356000 MIOXQ9UGB7 285 aa15.08■□□□□ 0
RTN3-205ENST00000356000 DPM1O60762 260 aa15.08■□□□□ 0
RTN3-205ENST00000356000 HIST1H2AGP0C0S8 130 aaPredicted RBP15.08■□□□□ 0
RTN3-205ENST00000356000 POU3F2P20265 443 aaPredicted RBP15.08■□□□□ 0
RTN3-205ENST00000356000 HIST1H2ADP20671 130 aa15.08■□□□□ 0
RTN3-205ENST00000356000 CAPZA1P52907 286 aa15.08■□□□□ 0
RTN3-205ENST00000356000 KIAA1024LP59773 190 aa15.08■□□□□ 0
RTN3-205ENST00000356000 DSC2Q02487 901 aa15.08■□□□□ 0
RTN3-205ENST00000356000 PKDCCQ504Y2 493 aa15.08■□□□□ 0
RTN3-205ENST00000356000 PRAMEF19Q5SWL8 479 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ANKS6Q68DC2 871 aa15.08■□□□□ 0
RTN3-205ENST00000356000 SLC6A19Q695T7 634 aa15.08■□□□□ 0
RTN3-205ENST00000356000 HIST2H2AA3Q6FI13 130 aa15.08■□□□□ 0
RTN3-205ENST00000356000 UNC5DQ6UXZ4 953 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ZPBP2Q6X784 338 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ZNF454Q8N9F8 522 aa15.08■□□□□ 0
RTN3-205ENST00000356000 RHEBL1Q8TAI7 183 aa15.08■□□□□ 0
RTN3-205ENST00000356000 SCARB1Q8WTV0 552 aa15.08■□□□□ 0
RTN3-205ENST00000356000 HIST1H2AHQ96KK5 128 aa15.08■□□□□ 0
RTN3-205ENST00000356000 PRMT6Q96LA8 375 aaPredicted RBP15.08■□□□□ 0
RTN3-205ENST00000356000 EPYCQ99645 322 aa15.08■□□□□ 0
RTN3-205ENST00000356000 HIST1H2AJQ99878 128 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ABCG4Q9H172 646 aa15.08■□□□□ 0
RTN3-205ENST00000356000 PORCNQ9H237 461 aa15.08■□□□□ 0
RTN3-205ENST00000356000 ZNF275Q9NSD4 429 aaPredicted RBP15.08■□□□□ 0
RTN3-205ENST00000356000 COMMD3Q9UBI1 195 aa15.08■□□□□ 0
RTN3-205ENST00000356000 BTNL2Q9UIR0 455 aa15.08■□□□□ 0
RTN3-205ENST00000356000 DUSP12Q9UNI6 340 aa15.08■□□□□ 0
RTN3-205ENST00000356000 DOCK5Q9H7D0 1870 aa15.07■□□□□ 0
RTN3-205ENST00000356000 CSO75390 466 aaKnown RBP15.07■□□□□ 0
RTN3-205ENST00000356000 UBA1P22314 1058 aaKnown RBP15.07■□□□□ 0
RTN3-205ENST00000356000 ACLYP53396 1101 aa15.07■□□□□ 0
RTN3-205ENST00000356000 ERVK-25P63136 954 aa15.07■□□□□ 0
RTN3-205ENST00000356000 SPHARQ15513 63 aa15.07■□□□□ 0
RTN3-205ENST00000356000 PDZD4Q76G19 769 aaPredicted RBP15.07■□□□□ 0
RTN3-205ENST00000356000 PIM3Q86V86 326 aa15.07■□□□□ 0
RTN3-205ENST00000356000 SH3RF2Q8TEC5 729 aa15.07■□□□□ 0
RTN3-205ENST00000356000 KATNB1Q9BVA0 655 aa15.07■□□□□ 0
RTN3-205ENST00000356000 ABHD16BQ9H3Z7 469 aa15.07■□□□□ 0
RTN3-205ENST00000356000 ARNT2Q9HBZ2 717 aa15.07■□□□□ 0
RTN3-205ENST00000356000 MYEF2Q9P2K5 600 aaKnown RBP15.07■□□□□ 0
RTN3-205ENST00000356000 MYLKQ15746 1914 aa15.07■□□□□ 0
RTN3-205ENST00000356000 SSC5DA1L4H1 1573 aa15.07■□□□□ 0
RTN3-205ENST00000356000 MTMR11A4FU01 709 aa15.07■□□□□ 0
RTN3-205ENST00000356000 DBX1A6NMT0 343 aa15.07■□□□□ 0
RTN3-205ENST00000356000 POM121CA8CG34 1229 aa15.07■□□□□ 0
RTN3-205ENST00000356000 ATG12O94817 140 aa15.07■□□□□ 0
RTN3-205ENST00000356000 SYPP08247 313 aa15.07■□□□□ 0
RTN3-205ENST00000356000 RNF224P0DH78 156 aa15.07■□□□□ 0
RTN3-205ENST00000356000 PIPP12273 146 aaPredicted RBP15.07■□□□□ 0
RTN3-205ENST00000356000 ACADLP28330 430 aa15.07■□□□□ 0
RTN3-205ENST00000356000 MMP12P39900 470 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms