RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SYT4Q9H2B2 425 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 SLC7A11Q9UPY5 501 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM88BA6NKF7 163 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 MMP20O60882 483 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 FARS2O95363 451 aaKnown RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 CD3GP09693 182 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 MSR1P21757 451 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ELK4P28324 431 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 TMBIM6P55061 237 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 LASP1Q14847 261 aaKnown RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 LAPTM4AQ15012 233 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 Q6ZVU0 165 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM126BQ8IUX1 230 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 OR9A1PQ8NGU1 263 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 MSANTD3Q96H12 275 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 LIN28AQ9H9Z2 209 aaKnown RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 GKN1Q9NS71 199 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 KDELR3O43731 214 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 HEXBP07686 556 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 GINS1Q14691 196 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 COL28A1Q2UY09 1125 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF776Q68DI1 518 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 XKR5Q6UX68 686 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 OR9I1Q8NGQ6 314 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 KIAA1191Q96A73 305 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 RDH12Q96NR8 316 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 SSX3Q99909 188 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 FN3KQ9H479 309 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 FZD3Q9NPG1 666 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 COL20A1Q9P218 1284 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 IQGAP1P46940 1657 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 HTRA2O43464 458 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 CAPN15O75808 1086 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 CREB5Q02930 508 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF763Q0D2J5 394 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 CELF5Q8N6W0 485 aaKnown RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 KCNA7Q96RP8 456 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 RAD9AQ99638 391 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ST14Q9Y5Y6 855 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 SH3PXD2BA1X283 911 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 SOWAHBA6NEL2 793 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ANKRD66B4E2M5 251 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 NRP1O14786 923 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 DFNA5O60443 496 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 SCGB2A1O75556 95 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 FRKP42685 505 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 RAB5BP61020 215 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ITPRIPL2Q3MIP1 535 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF678Q5SXM1 525 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 SHQ1Q6PI26 577 aaKnown RBP14.35□□□□□ -0.11
LMX1B-201ENST00000355497 DCUN1D3Q8IWE4 304 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 NEIL3Q8TAT5 605 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 LMX1AQ8TE12 382 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 SEZ6LQ9BYH1 1024 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 A0A1W2PPW3 197 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 FAAHO00519 579 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 FBP2O00757 339 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 AOC2O75106 756 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 DPP6P42658 865 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 MAGEA6P43360 314 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF84P51523 738 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ACTC1P68032 377 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ACTA1P68133 377 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 GAS6Q14393 721 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 ATP6AP1Q15904 470 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 FLYWCH1Q4VC44 716 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 EOGTQ5NDL2 527 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 SERTAD3Q9UJW9 196 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM98Q9Y2Y6 226 aa14.35□□□□□ -0.11
LMX1B-201ENST00000355497 CCDC163A0A0D9SF12 145 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 IL7P13232 177 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 LRP8Q14114 963 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 PIGGQ5H8A4 983 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 KCTD18Q6PI47 426 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-201ENST00000355497 TPRG1Q6ZUI0 275 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 LHFPL3Q86UP9 236 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 UBQLNLQ8IYU4 475 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 Q8N9G6 341 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-201ENST00000355497 ASCC1Q8N9N2 400 aaKnown RBP14.34□□□□□ -0.11
LMX1B-201ENST00000355497 REEP4Q9H6H4 257 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 EPHA6Q9UF33 1036 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 GMEB2Q9UKD1 530 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 H0YAE9 185 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 H2AFB2P0C5Z0 115 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 PTNP21246 168 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 GRIA2P42262 883 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 HSD11B2P80365 405 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 CDNFQ49AH0 187 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 RPLP0P6Q8NHW5 317 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 CLEC4DQ8WXI8 215 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 LCHNA4D1U4 455 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 ZBTB48P10074 688 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-201ENST00000355497 CFL1P23528 166 aaKnown RBP14.34□□□□□ -0.11
LMX1B-201ENST00000355497 GGT5P36269 586 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 ARSFP54793 590 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 DNAJB13P59910 316 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 KCNC4Q03721 635 aa14.34□□□□□ -0.11
LMX1B-201ENST00000355497 FGL1Q08830 312 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms