RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLC31A1O15431 190 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 AP2A2O94973 939 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 FKBP9O95302 570 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 TBC1D3HP0C7X1 549 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 PRPS2P11908 318 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 ENGP17813 658 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 IGFALSP35858 605 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 TRIM23P36406 574 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 KIR3DL1P43629 444 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 GSSP48637 474 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 SEPHS1P49903 392 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 TPMTP51580 245 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 CLDN2P57739 230 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 STARD3Q14849 445 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 CARTPTQ16568 116 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 IQCCQ4KMZ1 466 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 TBC1D3GQ6DHY5 549 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 TBC1D3CQ6IPX1 549 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 SDE2Q6IQ49 451 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 METTL2BQ6P1Q9 378 aaKnown RBP8.23□□□□□ -1.09
TRIM55-204ENST00000353317 PTOV1Q86YD1 416 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 TRAPPC5Q8IUR0 188 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 ZZZ3Q8IYH5 903 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 CFAP206Q8IYR0 622 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 TBC1D3Q8IZP1 549 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-204ENST00000353317 RNF175Q8N4F7 328 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 STARD8Q92502 1023 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 APOLD1Q96LR9 279 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 PANX1Q96RD7 426 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 ITPAQ9BY32 194 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 SLC17A9Q9BYT1 436 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 REXO4Q9GZR2 422 aaKnown RBP8.23□□□□□ -1.09
TRIM55-204ENST00000353317 SLC32A1Q9H598 525 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 ELOVL6Q9H5J4 265 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 RAD18Q9NS91 495 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 ARL15Q9NXU5 204 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 VPS4AQ9UN37 437 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 PCDHGA6Q9Y5G7 932 aa8.23□□□□□ -1.09
TRIM55-204ENST00000353317 EML5Q05BV3 1969 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 PABPN1LA6NDY0 278 aaKnown RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 M0R082 166 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 TBX1O43435 398 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 MRPS14O60783 128 aaKnown RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 POP7O75817 140 aaKnown RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ANXA5P08758 320 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 BDKRB1P46663 353 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 CLK1P49759 484 aaKnown RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 CDC20Q12834 499 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 AGERQ15109 404 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ZNF404Q494X3 552 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 COLEC12Q5KU26 742 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 PLEKHS1Q5SXH7 462 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 STEAP3Q658P3 488 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 FAHD1Q6P587 224 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 KIAA1324Q6UXG2 1013 aaKnown RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ADAMTSL4Q6UY14 1074 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 CBLL1Q75N03 491 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 LACC1Q8IV20 430 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 PGBD3Q8N328 593 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 HMGB4Q8WW32 186 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 IPCEF1Q8WWN9 437 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 PROX1Q92786 737 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 SLC38A4Q969I6 547 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 PITX2Q99697 317 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 YIPF2Q9BWQ6 316 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 SLC12A9Q9BXP2 914 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 EBPLQ9BY08 206 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 TEX101Q9BY14 249 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 FOXQ1Q9C009 403 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ATG10Q9H0Y0 220 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 REEP1Q9H902 201 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 SP140LQ9H930 580 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 CPNE5Q9HCH3 593 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 AMBNQ9NP70 447 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 KLHL42Q9P2K6 505 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 TMED5Q9Y3A6 229 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 NCOR1O75376 2440 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 FANCMQ8IYD8 2048 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 HEATR5BQ9P2D3 2071 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 KCNE1BA0A087WTH5 132 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 AGAP5A6NIR3 686 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 METTL15A6NJ78 407 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 E9PQ18 207 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 FPGTO14772 594 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 AIREO43918 545 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 SCN2BO60939 215 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ATG13O75143 517 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 VIPP01282 170 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 CBSLP0DN79 551 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 GPX2P18283 190 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 SERPINB1P30740 379 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 CBSP35520 551 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 CRYBA2P53672 197 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 ITGA1P56199 1179 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 MTAPQ13126 283 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 MLF2Q15773 248 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-204ENST00000353317 BCL7AQ4VC05 210 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 DEPDC1Q5TB30 811 aa8.22□□□□□ -1.09
TRIM55-204ENST00000353317 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms