RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ANXA3P12429 323 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CFL1P23528 166 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ITPKAP23677 461 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 HOXC13P31276 330 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ALDH9A1P49189 494 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CLCN4P51793 760 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CLDN20P56880 219 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PPP3R1P63098 170 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 BCL2L1Q07817 233 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CLVS2Q5SYC1 327 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 FRMPD2BQ6IN97 320 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 NOXRED1Q6NXP6 359 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TMEM81Q6P7N7 255 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 B3GLCTQ6Y288 498 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF782Q6ZMW2 699 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 USP45Q70EL2 814 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PIAS4Q8N2W9 510 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CELF5Q8N6W0 485 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF655Q8N720 491 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 LINC01465Q8N7H1 131 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 SRFBP1Q8NEF9 429 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 BEST4Q8NFU0 473 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GATAD2BQ8WXI9 593 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 MAPKAP1Q9BPZ7 522 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PIGUQ9H490 435 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 LIN7BQ9HAP6 207 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 NUDT15Q9NV35 164 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 NKIRAS2Q9NYR9 191 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PLEKHB1Q9UF11 243 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ADAM30Q9UKF2 790 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 HCN2Q9UL51 889 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CLEC4AQ9UMR7 237 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 A0A0D9SEW6 157 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GSAPA4D1B5 854 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CBX4O00257 560 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PTGESO14684 152 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TLX2O43763 284 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PCDH7O60245 1069 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ALDH1A1P00352 501 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GASTP01350 101 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 HBQ1P09105 142 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ETFAP13804 333 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 DGKAP23743 735 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 DNASE1P24855 282 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 SOAT1P35610 550 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 NUP62P37198 522 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PTGER3P43115 390 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ACLYP53396 1101 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 VSX2P58304 361 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 RPS25P62851 125 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 SELENOWP63302 87 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TSTA3Q13630 321 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 SF3A2Q15428 464 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TIGD5Q53EQ6 642 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 MARCH8Q5T0T0 291 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 OR2G6Q5TZ20 316 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 KIAA1324Q6UXG2 1013 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 HDDC2Q7Z4H3 204 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 NFKBIDQ8NI38 313 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 MTERF1Q99551 399 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 DUSP26Q9BV47 211 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TMED9Q9BVK6 235 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TAPBPLQ9BX59 468 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 CHIAQ9BZP6 476 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ABCG5Q9H222 651 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 FOLH1BQ9HBA9 442 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 SLAMF7Q9NQ25 335 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 OSER1Q9NX31 292 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ENOPH1Q9UHY7 261 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ELF5Q9UKW6 265 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 MRPS7Q9Y2R9 242 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 RPL36Q9Y3U8 105 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GNG14A0A1W2PPG7 69 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GTPBP1O00178 669 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PLATP00750 562 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ANXA5P08758 320 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF7P17097 686 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GPX2P18283 190 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PRPS1L1P21108 318 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ETV1P50549 477 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 HSF2Q03933 536 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ACSM2AQ08AH3 577 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 C10orf120Q5SQS8 335 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 AFMIDQ63HM1 303 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 ACSM2BQ68CK6 577 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 DLK2Q6UY11 383 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TRIM46Q7Z4K8 759 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 PLPP6Q8IY26 295 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 IQCF1Q8N6M8 205 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 C3orf58Q8NDZ4 430 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 GPR156Q8NFN8 814 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 OR6J1Q8NGC5 347 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 OR4A15Q8NGL6 344 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 TOE1Q96GM8 510 aaKnown RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 C16orf70Q9BSU1 422 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 BOCQ9BWV1 1114 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 SLC29A3Q9BZD2 475 aa7.31□□□□□ -1.24
BRCA1-201ENST00000352993 MS4A7Q9GZW8 240 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-201ENST00000352993 B3GAT2Q9NPZ5 323 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms