RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 EFCAB11Q9BUY7 163 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 CCDC32Q9BV29 185 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 NUAK2Q9H093 628 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 MAFFQ9ULX9 164 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 TSPAN11A1L157 253 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 PIPSLA2A3N6 862 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 TEX28O15482 410 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 GPX5O75715 221 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 GASTP01350 101 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 ZNF284Q2VY69 593 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 FRMPD2BQ6IN97 320 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 TMEM25Q86YD3 366 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 FBXO15Q8NCQ5 510 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-202ENST00000352393 IL17RDQ8NFM7 739 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 OPALINQ96PE5 141 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 GPBP1L1Q9HC44 474 aaPredicted RBP23.43■■□□□ 1.34
CPNE1-202ENST00000352393 RAB23Q9ULC3 237 aa23.43■■□□□ 1.34
CPNE1-202ENST00000352393 SAP18O00422 153 aaKnown RBP23.42■■□□□ 1.34
CPNE1-202ENST00000352393 ZNF197O14709 1029 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 C1orf105O95561 183 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 IFNW1P05000 195 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 NPPBP16860 134 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 ZNF658BQ4V348 819 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-202ENST00000352393 DEFB128Q7Z7B8 93 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 CELF2-AS1Q8N7Q2 184 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 RAET1EQ8TD07 263 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 APOBEC4Q8WW27 367 aaKnown RBP23.42■■□□□ 1.34
CPNE1-202ENST00000352393 MTERF3Q96E29 417 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 OR51B5Q9H339 312 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 SLC25A19Q9HC21 320 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 MOV10Q9HCE1 1003 aaKnown RBP23.42■■□□□ 1.34
CPNE1-202ENST00000352393 FZD3Q9NPG1 666 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 ITM2CQ9NQX7 267 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 SPG21Q9NZD8 308 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 TRAPPC4Q9Y296 219 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 KIAA1549LQ6ZVL6 1849 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 MTCL1Q9Y4B5 1905 aaKnown RBP23.42■■□□□ 1.34
CPNE1-202ENST00000352393 A0A1W2PRU2 124 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 LEFTY1O75610 366 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 KRT75O95678 551 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 TIMP2P16035 220 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 SOAT1P35610 550 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 ALDH9A1P49189 494 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 TAS2R50P59544 299 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.42■■□□□ 1.34
CPNE1-202ENST00000352393 TP53BP2Q13625 1128 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 TECPR1Q7Z6L1 1165 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 SLC30A8Q8IWU4 369 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 FAM46DQ8NEK8 389 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 PXYLP1Q8TE99 480 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 RHCGQ9UBD6 479 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 OGDHLQ9ULD0 1010 aa23.42■■□□□ 1.34
CPNE1-202ENST00000352393 LSM2Q9Y333 95 aaKnown RBP23.42■■□□□ 1.34
CPNE1-202ENST00000352393 CTDSP2O14595 271 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SSX4O60224 188 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 TGFB1P01137 390 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 C1GALT1C1LP0DN25 315 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 PBLDP30039 288 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-202ENST00000352393 BMPR1AP36894 532 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 RECQLP46063 649 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-202ENST00000352393 MYLIPQ8WY64 445 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SLC30A2Q9BRI3 323 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SGPP1Q9BX95 441 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SLC46A2Q9BY10 475 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SMURF1Q9HCE7 757 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 HMX1Q9NP08 348 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-202ENST00000352393 CRNNQ9UBG3 495 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-202ENST00000352393 DYRK1BQ9Y463 629 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 A0A1W2PRB8 838 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 FAM227AF5H4B4 570 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 APOA1P02647 267 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 NKX2-5P52952 324 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-202ENST00000352393 DSTNP60981 165 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 IFITM2Q01629 132 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 RHAGQ02094 409 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 TMEM115Q12893 351 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-202ENST00000352393 STARD3Q14849 445 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SF3B4Q15427 424 aaKnown RBP eCLIP23.41■■□□□ 1.341e-7■■■■■ 40
CPNE1-202ENST00000352393 AGAP6Q5VW22 663 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SPATC1Q76KD6 591 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 ADIPOR2Q86V24 386 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 AGAP4Q96P64 663 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 KCNS3Q9BQ31 491 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 SPNS1Q9H2V7 528 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 HHATLQ9HCP6 504 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 GULP1Q9UBP9 304 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 ZNF232Q9UNY5 417 aa23.41■■□□□ 1.34
CPNE1-202ENST00000352393 NEDD8-MDP1E9PL57 170 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 PSMD11O00231 422 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 FFAR1O14842 300 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 SCG5P05408 212 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 ENDOUP21128 410 aaKnown RBP23.4■■□□□ 1.34
CPNE1-202ENST00000352393 NR4A2P43354 598 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 PUM1Q14671 1186 aaKnown RBP eCLIP23.4■■□□□ 1.34
CPNE1-202ENST00000352393 IER5LQ5T953 404 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 TMEM220Q6QAJ8 160 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 UNC5DQ6UXZ4 953 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 DPPA4Q7L190 304 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 DDX53Q86TM3 631 aaKnown RBP23.4■■□□□ 1.34
CPNE1-202ENST00000352393 TAGAPQ8N103 731 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms