RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 UBE2ZQ9H832 354 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 RSL24D1Q9UHA3 163 aaKnown RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 MKLN1Q9UL63 735 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 MROH6A6NGR9 719 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 SLC9B1P1A6NJY1 282 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 PRLP01236 227 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 AOAHP28039 575 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 HOXC13P31276 330 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 DNAJA1P31689 397 aaKnown RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 MRPS21P82921 87 aaKnown RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 MERTKQ12866 999 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 CEACAM7Q14002 265 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 RPTNQ6XPR3 784 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 PSMA8Q8TAA3 256 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 ZFYVE21Q9BQ24 234 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 STRADBQ9C0K7 418 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 OR51I1Q9H343 314 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 SOX17Q9H6I2 414 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 ZBTB20Q9HC78 741 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 MS4A12Q9NXJ0 267 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 A0A0A6YYC8 382 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 H0Y8X5 98 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 I3L1I5 382 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 CASRP41180 1078 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 MLLT10P55197 1068 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 BLOC1S3Q6QNY0 202 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 C6orf89Q6UWU4 347 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 APLFQ8IW19 511 aaPredicted RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 OR2L2Q8NH16 312 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 FGF14Q92915 247 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
SMC6-201ENST00000351948 ABCB9Q9NP78 766 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 RARRES3Q9UL19 164 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 PCDHB3Q9Y5E6 796 aa13.12□□□□□ -0.31
SMC6-201ENST00000351948 K7ESM1 405 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 HCRTR2O43614 444 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 PRMT3O60678 531 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 UQCRC2P22695 453 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 HOXA9P31269 272 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 TTKP33981 857 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 CDH15P55291 814 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 CD47Q08722 323 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 RPA4Q13156 261 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 MLF2Q15773 248 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 TMPRSS11AQ6ZMR5 421 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 TMPRSS9Q7Z410 1059 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 GALNT12Q8IXK2 581 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 UBASH3BQ8TF42 649 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 C16orf78Q8WTQ4 265 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 OR5P2Q8WZ92 322 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 CIDECQ96AQ7 238 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 ALPK1Q96QP1 1244 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 SORT1Q99523 831 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 COPS4Q9BT78 406 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 IL1RAPQ9NPH3 570 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 CFL2Q9Y281 166 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 MICAL3Q7RTP6 2002 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 BCAS2O75934 225 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 AGR2O95994 175 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 LHCGRP22888 699 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 MANEALQ5VSG8 457 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 MOSPD2Q8NHP6 518 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.11□□□□□ -0.315e-12■■■■□ 21.7
SMC6-201ENST00000351948 C3orf30Q96M34 536 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 MCHR1Q99705 422 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 INPP5KQ9BT40 448 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 IL21Q9HBE4 155 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 NLGN3Q9NZ94 848 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 GPRC5BQ9NZH0 403 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 C1orf226A1L170 272 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 ANXA8P13928 327 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 POU6F2P78424 691 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 FRMD1Q8N878 549 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 EGLN2Q96KS0 407 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 PLGRKTQ9HBL7 147 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 THAP10Q9P2Z0 257 aaPredicted RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 CPNE7Q9UBL6 633 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 PLEKHM1Q9Y4G2 1056 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 TMCC2O75069 709 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 RDH16O75452 317 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 CAPN3P20807 821 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 ITGB8P26012 769 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 ACSL1P33121 698 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 MAZP56270 477 aaKnown RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 ZC3H14Q6PJT7 736 aaKnown RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 CXXC5Q7LFL8 322 aaKnown RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 TSEN15Q8WW01 171 aaKnown RBP13.11□□□□□ -0.31
SMC6-201ENST00000351948 DHRS4Q9BTZ2 278 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 TTTY10Q9BZA0 68 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 C1orf21Q9H246 121 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms