RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 DDX31Q9H8H2 851 aaKnown RBP13.15□□□□□ -0.3
SEC13-202ENST00000350697 LANCL2Q9NS86 450 aa13.15□□□□□ -0.3
SEC13-202ENST00000350697 MKL2Q9ULH7 1088 aa13.15□□□□□ -0.3
SEC13-202ENST00000350697 POLHQ9Y253 713 aa13.15□□□□□ -0.3
SEC13-202ENST00000350697 TRAF6Q9Y4K3 522 aa13.15□□□□□ -0.3
SEC13-202ENST00000350697 SCN2AQ99250 2005 aa13.15□□□□□ -0.3
SEC13-202ENST00000350697 PCDH17O14917 1159 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 ITM2AO43736 263 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 LYPLA1O75608 230 aaPredicted RBP13.14□□□□□ -0.31
SEC13-202ENST00000350697 FURINP09958 794 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 SLC1A6P48664 564 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 PPP2R2AP63151 447 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 MINDY4Q4G0A6 757 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 SH2D4BQ5SQS7 431 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 ATG14Q6ZNE5 492 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 RNF165Q6ZSG1 346 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 GPR155Q7Z3F1 870 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 TRIM46Q7Z4K8 759 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 MRGPREQ86SM8 312 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 RAB3IL1Q8TBN0 382 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 RBCK1Q9BYM8 510 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 VN1R1Q9GZP7 353 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 KCMF1Q9P0J7 381 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 ADAM29Q9UKF5 820 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
SEC13-202ENST00000350697 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 SPACA6W5XKT8 324 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 CACNA1GO43497 2377 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 NUP210LQ5VU65 1888 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
SEC13-202ENST00000350697 A0A0A6YYD5 115 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 EEDO75530 441 aaKnown RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 CHN1P15882 459 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 BST1Q10588 318 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 TBL3Q12788 808 aaKnown RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 UGT3A2Q3SY77 523 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ATG16L1Q676U5 607 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 CYP20A1Q6UW02 462 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 SCIMPQ6UWF3 145 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 COMMD6Q7Z4G1 85 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 PPP1R32Q7Z5V6 425 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 METTL21AQ8WXB1 218 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 VPS50Q96JG6 964 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ILKAPQ9H0C8 392 aaPredicted RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 MANSC1Q9H8J5 431 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 LYARQ9NX58 379 aaKnown RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 MS4A12Q9NXJ0 267 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ZDHHC2Q9UIJ5 367 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 RAP2CQ9Y3L5 183 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 DNAJC15Q9Y5T4 150 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 HS3ST3B1Q9Y662 390 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ARHGAP10A1A4S6 786 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 BLACEA4D250 179 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 TMEM233B4DJY2 109 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 FAM227AF5H4B4 570 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 SLC28A1O00337 649 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 CYR61O00622 381 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 PEX12O00623 359 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 CLDN4O14493 209 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 B4GALT2O60909 372 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ALOX12BO75342 701 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 KLK1P06870 262 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 EFNA3P52797 238 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 TERF2Q15554 542 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 IMPG1Q17R60 797 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 DEFB109BQ30KR1 87 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 SPIN4Q56A73 249 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 SPDYAQ5MJ70 313 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 CCNYL2Q5T2Q4 361 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 MRM1Q6IN84 353 aaKnown RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 TMEM205Q6UW68 189 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 QSOX2Q6ZRP7 698 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 GPR180Q86V85 440 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ZNF595Q8IYB9 648 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 C1orf52Q8N6N3 182 aaKnown RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 FAM47BQ8NA70 645 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 PLPP5Q8NEB5 264 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 CHTF18Q8WVB6 975 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 TWIST2Q8WVJ9 160 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 C20orf27Q9GZN8 174 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 ZNF395Q9H8N7 513 aaPredicted RBP13.13□□□□□ -0.31
SEC13-202ENST00000350697 PHF11Q9UIL8 331 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 FBXW2Q9UKT8 454 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 MAN2B2Q9Y2E5 1009 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 MMACHCQ9Y4U1 282 aa13.13□□□□□ -0.31
SEC13-202ENST00000350697 OR2W5A6NFC9 320 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 SOCS6O14544 535 aa13.12□□□□□ -0.31
SEC13-202ENST00000350697 KLF11O14901 512 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms