RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 A0A0U1RQS6 177 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 A0A1W2PQ72 361 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 FAM172BPA6NC97 362 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 SLC31A1O15431 190 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 HOXB2P14652 356 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 NKX2-5P52952 324 aaPredicted RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 CRISP1P54107 249 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 ANKRD33Q7Z3H0 272 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 ZNF548Q8NEK5 533 aaPredicted RBP14.17□□□□□ -0.14
NUP50-201ENST00000347635 EPYCQ99645 322 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 TUBB1Q9H4B7 451 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 TAS2R9Q9NYW1 312 aa14.17□□□□□ -0.14
NUP50-201ENST00000347635 RIIAD1A6NNX1 92 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 JUNBP17275 347 aaPredicted RBP14.16□□□□□ -0.14
NUP50-201ENST00000347635 UQCRC2P22695 453 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 SUZ12Q15022 739 aaKnown RBP14.16□□□□□ -0.14
NUP50-201ENST00000347635 SLC5A8Q8N695 610 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 FAM110BQ8TC76 370 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 HOXD12P35452 270 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 FAM189BP81408 668 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 MGAT3Q09327 533 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 TEX26Q8N6G2 289 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 NTMT1Q9BV86 223 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 TMED9Q9BVK6 235 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 BHLHE41Q9C0J9 482 aaPredicted RBP14.16□□□□□ -0.14
NUP50-201ENST00000347635 IRF2BPLQ9H1B7 796 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 AGAP5A6NIR3 686 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 CCR8P51685 355 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 FATE1Q969F0 183 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 SLC39A13Q96H72 371 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 ZNF583Q96ND8 569 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 GDE1Q9NZC3 331 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 DLGAP4Q9Y2H0 992 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 PCDHGB6Q9Y5F9 930 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 RCVRNP35243 200 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 DOC2AQ14183 400 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 ADNP2Q6IQ32 1131 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 SNX29P2Q8IUI4 249 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 LCN9Q8WX39 176 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 ABCG2Q9UNQ0 655 aa14.16□□□□□ -0.14
NUP50-201ENST00000347635 K7ERQ8 282 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 CA3P07451 260 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 LAMP1P11279 417 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 DSC1Q08554 894 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 RANBP3LQ86VV4 465 aaPredicted RBP14.15□□□□□ -0.14
NUP50-201ENST00000347635 OR10H4Q8NGA5 316 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 MAL2Q969L2 176 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ACPTQ9BZG2 426 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ZNF385DQ9H6B1 395 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ACOT13Q9NPJ3 140 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 FBXL12Q9NXK8 326 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 AASSQ9UDR5 926 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 HEPACAM2A8MVW5 462 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 SLC6A4P31645 630 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 NUP62P37198 522 aaPredicted RBP14.15□□□□□ -0.14
NUP50-201ENST00000347635 LIPKQ5VXJ0 399 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 MEDAGQ5VYS4 303 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 CPZQ66K79 652 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 LRRTM4Q86VH4 590 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 MEIOBQ8N635 442 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 RDH14Q9HBH5 336 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ANKMY1Q9P2S6 941 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 NUAK1O60285 661 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 HLA-DPB1P04440 258 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 RHCEP18577 417 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 SDC1P18827 310 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ACSL1P33121 698 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 AVPR1BP47901 424 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 LMAN2Q12907 356 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ZNF805Q5CZA5 627 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 SMARCD3Q6STE5 483 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 SLC36A4Q6YBV0 504 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 DENND6BQ8NEG7 585 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 RGMAQ96B86 450 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 SLC12A9Q9BXP2 914 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 SH3D21A4FU49 640 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 TARM1B6A8C7 271 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 FAAHO00519 579 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 LAMP2P13473 410 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 TCF3P15923 654 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 CCR4P51679 360 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ADAM15Q13444 863 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 RGNQ15493 299 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 TBPL2Q6SJ96 375 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 TTLQ8NG68 377 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 FIBINQ8TAL6 211 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 PDLIM5Q96HC4 596 aaKnown RBP14.15□□□□□ -0.14
NUP50-201ENST00000347635 TEX37Q96LM6 180 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 YIPF4Q9BSR8 244 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 ABCG4Q9H172 646 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 TNFRSF12AQ9NP84 129 aa14.15□□□□□ -0.14
NUP50-201ENST00000347635 DAPL1A0PJW8 107 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 C2orf78A6NCI8 922 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 SOBPA7XYQ1 873 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 DEFB103AP81534 67 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 ZXDBP98169 803 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 TMIGD1Q6UXZ0 262 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 RNF44Q7L0R7 432 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 HMGB4Q8WW32 186 aa14.14□□□□□ -0.15
NUP50-201ENST00000347635 MCOLN1Q9GZU1 580 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms