RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SLC1A6P48664 564 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 WDR4P57081 412 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 CXADRP78310 365 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 MAT1AQ00266 395 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 KLC1Q07866 573 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 ACSM2AQ08AH3 577 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 SLAMF1Q13291 335 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 UGT8Q16880 541 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 TUBB8Q3ZCM7 444 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 MINDY4Q4G0A6 757 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 SPIN4Q56A73 249 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 VWA2Q5GFL6 755 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 SPDYAQ5MJ70 313 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 SH2D4BQ5SQS7 431 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 ACSM2BQ68CK6 577 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 INO80CQ6PI98 192 aaPredicted RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 COX15Q7KZN9 410 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 PRSS41Q7RTY9 318 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 ZCCHC7Q8N3Z6 543 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 DTWD1Q8N5C7 304 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 ARFGAP2Q8N6H7 521 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 ZNF511Q8NB15 262 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 OR6Y1Q8NGX8 325 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 PEX11GQ96HA9 241 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 METTL2AQ96IZ6 378 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 SOX17Q9H6I2 414 aaPredicted RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 DDX31Q9H8H2 851 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 MANSC1Q9H8J5 431 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 WDR41Q9HAD4 459 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 FARSBQ9NSD9 589 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 THAP1Q9NVV9 213 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 LYARQ9NX58 379 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 C19orf25Q9UFG5 118 aaPredicted RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 POLHQ9Y253 713 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 RAP2CQ9Y3L5 183 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 CDC14CA4D256 554 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 IDSB3KWA1 339 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 PLPP1O14494 284 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 NKX2-8O15522 239 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 PRMT3O60678 531 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 SCELO95171 688 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 TBX6O95947 436 aaPredicted RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 CHRNGP07510 517 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 PRKAR1AP10644 381 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 OTX2P32243 289 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 BUD31P41223 144 aaPredicted RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 CCR10P46092 362 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 RPL14P50914 215 aaKnown RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 RRADP55042 308 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 RAB38P57729 211 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 RPS18P62269 152 aaKnown RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 OLR1P78380 273 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 COL9A2Q14055 689 aaPredicted RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 ABRAXAS2Q15018 415 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 SYT16Q17RD7 645 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 CCNYL2Q5T2Q4 361 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 MED25Q71SY5 747 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 GPR155Q7Z3F1 870 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 TRIM46Q7Z4K8 759 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 UBE3DQ7Z6J8 389 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 GPR180Q86V85 440 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 DDIASQ8IXT1 998 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 ZNF595Q8IYB9 648 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 PRSS58Q8IYP2 241 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 METTL4Q8N3J2 472 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 OR5T3Q8NGG3 340 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 SNRNP27Q8WVK2 155 aaKnown RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 FER1L6-AS2Q96M78 137 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 KCNA7Q96RP8 456 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 AICDAQ9GZX7 198 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 CPNE5Q9HCH3 593 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 INTS9Q9NV88 658 aaKnown RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 DAPP1Q9UN19 280 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 FIS1Q9Y3D6 152 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 MRPS18BQ9Y676 258 aaKnown RBP11.17□□□□□ -0.62
SNCA-202ENST00000345009 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
SNCA-202ENST00000345009 FER1L5A0AVI2 2057 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 RTCAO00442 366 aaKnown RBP11.16□□□□□ -0.62
SNCA-202ENST00000345009 KLF11O14901 512 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 B4GALT2O60909 372 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 KLK1P06870 262 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 FAM58BPP0C7Q3 252 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 C8orf89P0DMQ9 161 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 NR1D1P20393 614 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 CPN2P22792 545 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 CERS1P27544 350 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 SERPINB3P29508 390 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 PPP2R1BP30154 601 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 BSGP35613 385 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 GSTM5P46439 218 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 MAPK12P53778 367 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 FOXA1P55317 472 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 LIM2P55344 173 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 HSD17B7P56937 341 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 AP2B1P63010 937 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 BST1Q10588 318 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 CDC20Q12834 499 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 SRSF6Q13247 344 aaKnown RBP11.16□□□□□ -0.62
SNCA-202ENST00000345009 BIKQ13323 160 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 RUNX2Q13950 521 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms