RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 FAR1Q8WVX9 515 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 ATP6V1E2Q96A05 226 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 UTP23Q9BRU9 249 aaKnown RBP15.06■□□□□ 0
ATG4B-201ENST00000344376 MRPL46Q9H2W6 279 aaKnown RBP15.06■□□□□ 0
ATG4B-201ENST00000344376 PRDM7Q9NQW5 492 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 ZNF358Q9NW07 568 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 PRRC2CQ9Y520 2896 aaKnown RBP15.05■□□□□ -0
ATG4B-201ENST00000344376 BLACEA4D250 179 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 A8MUA0 341 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 STX16-NPEPL1H3BU86 382 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 STX16O14662 325 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 SH3BGRLO75368 114 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 SIX3O95343 332 aaPredicted RBP15.05■□□□□ -0
ATG4B-201ENST00000344376 HIST1H1TP22492 207 aaPredicted RBP15.05■□□□□ -0
ATG4B-201ENST00000344376 ATP5A1P25705 553 aaKnown RBP15.05■□□□□ -0
ATG4B-201ENST00000344376 EEF1DP29692 281 aaKnown RBP15.05■□□□□ -0
ATG4B-201ENST00000344376 EIF2S3LQ2VIR3 472 aaKnown RBP15.05■□□□□ -0
ATG4B-201ENST00000344376 HUS1BQ8NHY5 278 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 ELP5Q8TE02 316 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 PHF21BQ96EK2 531 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 MRPL57Q9BQC6 102 aaKnown RBP15.05■□□□□ -0
ATG4B-201ENST00000344376 OLAHQ9NV23 265 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 TSC22D4Q9Y3Q8 395 aa15.05■□□□□ -0
ATG4B-201ENST00000344376 RP1L1Q8IWN7 2480 aaPredicted RBP15.04■□□□□ -0
ATG4B-201ENST00000344376 LRRC14BA6NHZ5 514 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 H0YIV9 168 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 E2F3O00716 465 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 CDK2AP1O14519 115 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 MYO1DO94832 1006 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 SCELO95171 688 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 EDN3P14138 238 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 STX4Q12846 297 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 DEPDC1Q5TB30 811 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 RPS19BP1Q86WX3 136 aaKnown RBP15.04■□□□□ -0
ATG4B-201ENST00000344376 HORMAD2Q8N7B1 307 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 ACOT4Q8N9L9 421 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 C7orf57Q8NEG2 295 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 B3GNT7Q8NFL0 401 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 RGMAQ96B86 450 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 CSF3RQ99062 836 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 MTERF1Q99551 399 aaKnown RBP15.04■□□□□ -0
ATG4B-201ENST00000344376 DEFB126Q9BYW3 111 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 OR51B5Q9H339 312 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 DMRT3Q9NQL9 472 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 PNO1Q9NRX1 252 aaKnown RBP15.04■□□□□ -0
ATG4B-201ENST00000344376 SHANK1Q9Y566 2161 aa15.04■□□□□ -0
ATG4B-201ENST00000344376 IQANK1A0A1B0GTG1 560 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 GABRR3A8MPY1 467 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 SAP18O00422 153 aaKnown RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 RTCAO00442 366 aaKnown RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 CYR61O00622 381 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 CTNSO60931 367 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 RASAL1O95294 804 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 CLDN9O95484 217 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 CRYABP02511 175 aaKnown RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 PTX3P26022 381 aaPredicted RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 CLCN2P51788 898 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 CCNG1P51959 295 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 HNRNPFP52597 415 aaKnown RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 OC90Q02509 493 aaPredicted RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 SRSF1Q07955 248 aaKnown RBP eCLIP15.03■□□□□ -06e-6■■□□□ 12.9
ATG4B-201ENST00000344376 TUBA3CQ13748 450 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 CPSF6Q16630 551 aaKnown RBP eCLIP15.03■□□□□ -0
ATG4B-201ENST00000344376 ZNF766Q5HY98 468 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 TUBA3EQ6PEY2 450 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 ADGRD1Q6QNK2 874 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 ZNF793Q6ZN11 406 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 TIFABQ6ZNK6 161 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 UBE3DQ7Z6J8 389 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 MTERF4Q7Z6M4 381 aaKnown RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 CLNKQ7Z7G1 428 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 KIF2BQ8N4N8 673 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 L3MBTL4Q8NA19 623 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 C5orf34Q96MH7 638 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 CCDC77Q9BR77 488 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 CDCP1Q9H5V8 836 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 NOL11Q9H8H0 719 aaKnown RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 ADAP2Q9NPF8 381 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 PSMC3IPQ9P2W1 217 aaPredicted RBP15.03■□□□□ -0
ATG4B-201ENST00000344376 FETUBQ9UGM5 382 aa15.03■□□□□ -0
ATG4B-201ENST00000344376 FCHO1O14526 889 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 IFNA16P05015 189 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 FAM153BP0C7A2 387 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 CD46P15529 392 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 CPN2P22792 545 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 ARFIP1P53367 373 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 RPS13P62277 151 aaKnown RBP15.02■□□□□ -0
ATG4B-201ENST00000344376 SERTAD2Q14140 314 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 OR1C1Q15619 314 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 ELAVL1Q15717 326 aaKnown RBP15.02■□□□□ -0
ATG4B-201ENST00000344376 FAM153CQ494X1 144 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 OR4C11Q6IEV9 310 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 LCA5Q86VQ0 697 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 TMEM132CQ8N3T6 1108 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 EIF1ADQ8N9N8 165 aaKnown RBP15.02■□□□□ -0
ATG4B-201ENST00000344376 TMEM52Q8NDY8 209 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 NFAM1Q8NET5 270 aaPredicted RBP15.02■□□□□ -0
ATG4B-201ENST00000344376 VMP1Q96GC9 406 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 MAPKAP1Q9BPZ7 522 aa15.02■□□□□ -0
ATG4B-201ENST00000344376 MS4A12Q9NXJ0 267 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms