RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SYT16Q17RD7 645 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 PNCKQ6P2M8 343 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 LCTLQ6UWM7 567 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 Q6ZNX1 250 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 SZRD1Q7Z422 152 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 SVOPQ8N4V2 548 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 SETD7Q8WTS6 366 aaKnown RBP14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 COPS4Q9BT78 406 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 ALOXE3Q9BYJ1 711 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 NLNQ9BYT8 704 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 PRSS16Q9NQE7 514 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 SNX11Q9Y5W9 270 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 GMEB1Q9Y692 573 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 TRBC2A0A5B9 178 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 FAM227AF5H4B4 570 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 DNAJB5O75953 348 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 IDUAP35475 653 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 CCR3P51677 355 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 CLCNKAP51800 687 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 DSTNP60981 165 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 UBE3AQ05086 875 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 EEF1A2Q05639 463 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 RBBP4Q09028 425 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 C10orf62Q5T681 223 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 EGFLAMQ63HQ2 1017 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 CEACAM20Q6UY09 585 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 LRRTM4Q86VH4 590 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 CCDC103Q8IW40 242 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 NLGN4XQ8N0W4 816 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 SMARCD2Q92925 531 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 RAB8BQ92930 207 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 EXOSC8Q96B26 276 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 YIPF6Q96EC8 236 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 ZNF347Q96SE7 839 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 TMEM38AQ9H6F2 299 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 ANGPT4Q9Y264 503 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 PLXND1Q9Y4D7 1925 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 SCAMP1O15126 338 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 MID1O15344 667 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 NADKO95544 446 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 KRT75O95678 551 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 BCHEP06276 602 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 GGT2P36268 569 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 MANFP55145 182 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 DUSP7Q16829 419 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 MICAQ29983 383 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 ZNF630Q2M218 657 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 WSCD2Q2TBF2 565 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 PIP5KL1Q5T9C9 394 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 KHDRBS2Q5VWX1 349 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 FAM109BQ6ICB4 259 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 PRSS48Q7RTY5 328 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 IGFN1Q86VF2 1251 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 SNX29P2Q8IUI4 249 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 FAM20CQ8IXL6 584 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 OR4C15Q8NGM1 316 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 GEMIN6Q8WXD5 167 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 CCNB1IP1Q9NPC3 277 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 SLC6A14Q9UN76 642 aa14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 FAM32AQ9Y421 112 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-202ENST00000343765 HNRNPCP07910 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 ARAFP10398 606 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 CD36P16671 472 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 SLC19A1P41440 591 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 EIF4HQ15056 248 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 SPDYE7PQ495Y7 208 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 SYT6Q5T7P8 510 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 DSG4Q86SJ6 1040 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 HORMAD2Q8N7B1 307 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 UCN3Q969E3 161 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 COX14Q96I36 57 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 AIF1LQ9BQI0 150 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 XKR8Q9H6D3 395 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 MBNL1Q9NR56 388 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 DPM1O60762 260 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 DEPDC1Q5TB30 811 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 OR5K2Q8NHB8 316 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 PHF10Q8WUB8 498 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 TRUB1Q8WWH5 349 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 SH3YL1Q96HL8 342 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 ZNF717Q9BY31 904 aaPredicted RBP14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 ZNF556Q9HAH1 456 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 GPR83Q9NYM4 423 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 AHSPQ9NZD4 102 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 HCN2Q9UL51 889 aa14.19□□□□□ -0.14
VIPAS39-202ENST00000343765 TRPM6Q9BX84 2022 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 C5orf58C9J3I9 102 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 SLC22A1O15245 554 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 PPM1DO15297 605 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 OR1F1O43749 312 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 GADD45GO95257 159 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 CA3P07451 260 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 SLC35G4P0C7Q5 338 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 ACP5P13686 325 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 DDCP20711 480 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 UQCRC2P22695 453 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 ACVR2AP27037 513 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 PTGER1P34995 402 aa14.18□□□□□ -0.14
VIPAS39-202ENST00000343765 RXRGP48443 463 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms