RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 CCDC88CQ9P219 2028 aa20.74■□□□□ 0.91
RBM38-201ENST00000342690 ADAM29Q9UKF5 820 aa20.74■□□□□ 0.91
RBM38-201ENST00000342690 EDF1O60869 148 aaKnown RBP20.73■□□□□ 0.91
RBM38-201ENST00000342690 SEC22BO75396 215 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 SCELO95171 688 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 PRPH2P23942 346 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 BSGP35613 385 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 FOLR3P41439 243 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 OCA2Q04671 838 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 VWA2Q5GFL6 755 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 ATP1A1-AS1Q5TC04 95 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 ZNF793Q6ZN11 406 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 SHISA6Q6ZSJ9 500 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 ZC3H7AQ8IWR0 971 aaKnown RBP20.73■□□□□ 0.91
RBM38-201ENST00000342690 ZCCHC7Q8N3Z6 543 aaKnown RBP20.73■□□□□ 0.91
RBM38-201ENST00000342690 ZSCAN1Q8NBB4 408 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 OR2Y1Q8NGV0 311 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 OR2T11Q8NH01 316 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 OR51Q1Q8NH59 317 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 METTL2AQ96IZ6 378 aaKnown RBP20.73■□□□□ 0.91
RBM38-201ENST00000342690 PPP1R36Q96LQ0 422 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 PPP3R2Q96LZ3 170 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 NUF2Q9BZD4 464 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 DDX31Q9H8H2 851 aaKnown RBP20.73■□□□□ 0.91
RBM38-201ENST00000342690 LRTM1Q9HBL6 345 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 MKKSQ9NPJ1 570 aaPredicted RBP20.73■□□□□ 0.91
RBM38-201ENST00000342690 C1orf109Q9NX04 203 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 NXT1Q9UKK6 140 aaKnown RBP20.73■□□□□ 0.91
RBM38-201ENST00000342690 CCL27Q9Y4X3 112 aa20.73■□□□□ 0.91
RBM38-201ENST00000342690 NPIPB8E9PQR5 432 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 POLR3GO15318 223 aaPredicted RBP20.72■□□□□ 0.91
RBM38-201ENST00000342690 VPS4BO75351 444 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 MYO1DO94832 1006 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 KLK1P06870 262 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 UMODP07911 640 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 VIMP08670 466 aaKnown RBP20.72■□□□□ 0.91
RBM38-201ENST00000342690 FURINP09958 794 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 ZGLP1P0C6A0 271 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 PRKAR1AP10644 381 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 RNH1P13489 461 aaKnown RBP20.72■□□□□ 0.91
RBM38-201ENST00000342690 MC1RQ01726 317 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 CDC20Q12834 499 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 ERV3-1Q14264 604 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 COL28A1Q2UY09 1125 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 GALNTL6Q49A17 601 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 ATP6AP1LQ52LC2 224 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 CCNYL2Q5T2Q4 361 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 Q6ZSR9 355 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 PRSS58Q8IYP2 241 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 ADAMTS18Q8TE60 1221 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 MIEF2Q96C03 454 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 TUBGCP3Q96CW5 907 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 APIPQ96GX9 242 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 ZNF717Q9BY31 904 aaPredicted RBP20.72■□□□□ 0.91
RBM38-201ENST00000342690 MEAF6Q9HAF1 191 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 LYARQ9NX58 379 aaKnown RBP20.72■□□□□ 0.91
RBM38-201ENST00000342690 SPACA6W5XKT8 324 aa20.72■□□□□ 0.91
RBM38-201ENST00000342690 ZFHX4Q86UP3 3567 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 A0A0A6YYD5 115 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 ATP6AP2A0A1C7CYW4 349 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 PSMD12O00232 456 aaPredicted RBP20.71■□□□□ 0.91
RBM38-201ENST00000342690 LSM1O15116 133 aaKnown RBP20.71■□□□□ 0.91
RBM38-201ENST00000342690 CHST10O43529 356 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 EEDO75530 441 aaKnown RBP20.71■□□□□ 0.91
RBM38-201ENST00000342690 ATP6AP2O75787 350 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 JUNP05412 331 aaKnown RBP20.71■□□□□ 0.91
RBM38-201ENST00000342690 XCR1P46094 333 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 KLC1Q07866 573 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 SLAMF1Q13291 335 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 CRTC2Q53ET0 693 aaPredicted RBP20.71■□□□□ 0.91
RBM38-201ENST00000342690 CA13Q8N1Q1 262 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 SNRNP27Q8WVK2 155 aaKnown RBP20.71■□□□□ 0.91
RBM38-201ENST00000342690 PEX11GQ96HA9 241 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 C3orf30Q96M34 536 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 TGIF2Q9GZN2 237 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 PRORYQ9H606 182 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 LYRM4Q9HD34 91 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 C14orf105Q9NVL8 296 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 PHF11Q9UIL8 331 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 USH1CQ9Y6N9 552 aa20.71■□□□□ 0.91
RBM38-201ENST00000342690 ANKRD11Q6UB99 2663 aaPredicted RBP20.71■□□□□ 0.91
RBM38-201ENST00000342690 USP24Q9UPU5 2620 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 GNG14A0A1W2PPG7 69 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 CDC14CA4D256 554 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 PCDH7O60245 1069 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 PEX11AO75192 247 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 JRKO75564 520 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 BMP10O95393 424 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 RECKO95980 971 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 GBAP04062 536 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 IL10P22301 178 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 TIA1P31483 386 aaKnown RBP eCLIP20.7■□□□□ 0.9
RBM38-201ENST00000342690 MAPK12P53778 367 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 GYS2P54840 703 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 RAB38P57729 211 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 RPL38P63173 70 aaKnown RBP20.7■□□□□ 0.9
RBM38-201ENST00000342690 RUNX2Q13950 521 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 UGT8Q16880 541 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 EFCAB3Q8N7B9 438 aa20.7■□□□□ 0.9
RBM38-201ENST00000342690 ADAMTS17Q8TE56 1095 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms