RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CWF19L1Q69YN2 538 aaKnown RBP14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF689Q96CS4 500 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-202ENST00000342494 TMEM41AQ96HV5 264 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 LMAN1LQ9HAT1 526 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 TIMMDC1Q9NPL8 285 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 S100A6P06703 90 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 SPARCP09486 303 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 XRCC1P18887 633 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 MAPK3P27361 379 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 FAM69BQ5VUD6 431 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 ALDH16A1Q8IZ83 802 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 STON2Q8WXE9 905 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 NSMAFQ92636 917 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF382Q96SR6 550 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 HERPUD2Q9BSE4 406 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 TMA7Q9Y2S6 64 aaKnown RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 OARD1Q9Y530 152 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 RICTORQ6R327 1708 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 AFDNP55196 1824 aaKnown RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 C1orf226A1L170 272 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 K7ERQ8 282 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 ACOT7O00154 380 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 P04436 131 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 OR12D1P0DN82 309 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 CRTC1Q6UUV9 634 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 TMEM25Q86YD3 366 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 APCDD1Q8J025 514 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 OR51I1Q9H343 314 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 CCDC59Q9P031 241 aaKnown RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 OR1A2Q9Y585 309 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 GRXCR2A6NFK2 248 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 PDLIM1O00151 329 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 TOR1BO14657 336 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 EIF5AP63241 154 aaKnown RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 GRM7Q14831 915 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 LRRC25Q8N386 305 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 PEX13Q92968 403 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 SIGLEC10Q96LC7 697 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 NELL2Q99435 816 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 DFNA5O60443 496 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 OAZ2O95190 189 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 H6PDO95479 791 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 HLA-DPB1P04440 258 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 PITX1P78337 314 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-202ENST00000342494 SPERTQ8NA61 448 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 GNPDA2Q8TDQ7 276 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 MRGPRX2Q96LB1 330 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 TRPV4Q9HBA0 871 aa14.43□□□□□ -0.1
UBE3B-202ENST00000342494 H3BUI4 141 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 EMC8O43402 210 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 EDNRBP24530 442 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 DSC1Q08554 894 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 SMYD5Q6GMV2 418 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 OR5T2Q8NGG2 359 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 RHBDD1Q8TEB9 315 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 TMEM121BQ9BXQ6 578 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-202ENST00000342494 AASSQ9UDR5 926 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 HBQ1P09105 142 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 PSKH1P11801 424 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 CARD17Q5XLA6 110 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 EPGNQ6UW88 154 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 SLC36A4Q6YBV0 504 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 GIMAP2Q9UG22 337 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 PMF1-BGLAPU3KQ54 211 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 COL1A1P02452 1464 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-202ENST00000342494 GPR89AB7ZAQ6 455 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 GPR37L1O60883 481 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF821O75541 412 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-202ENST00000342494 SCGB1D2O95969 90 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF806P0C7X5 589 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 GPR89BP0CG08 455 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 ADRB3P13945 408 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 PVALBP20472 110 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-202ENST00000342494 MLLT1Q03111 559 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-202ENST00000342494 RNF220Q5VTB9 566 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 TIFABQ6ZNK6 161 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 KCNK13Q9HB14 408 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 ACTR3BQ9P1U1 418 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 HCN4Q9Y3Q4 1203 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 CLPXO76031 633 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 TIA1P31483 386 aaKnown RBP eCLIP14.42□□□□□ -0.1
UBE3B-202ENST00000342494 HERV-K104P61576 105 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 KCNC4Q03721 635 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 RABL3Q5HYI8 236 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 ASB18Q6ZVZ8 466 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 NAA11Q9BSU3 229 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-202ENST00000342494 SLC7A8Q9UHI5 535 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 TMEM59LQ9UK28 342 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 SCML1Q9UN30 329 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 MGAT4BQ9UQ53 548 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 PROM1O43490 865 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 EPCAMP16422 314 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 PGCP20142 388 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 DRD1P21728 446 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 CD70P32970 193 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 GRK5P34947 590 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 GNG2P59768 71 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 OR52E8Q6IFG1 317 aa14.42□□□□□ -0.1
UBE3B-202ENST00000342494 PIGWQ7Z7B1 504 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms