RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 OXR1Q8N573 874 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 FAM83FQ8NEG4 500 aaPredicted RBP13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 GEMIN6Q8WXD5 167 aaKnown RBP13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 OTUB1Q96FW1 271 aaPredicted RBP13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 OR5M11Q96RB7 305 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 PIP5K1AQ99755 562 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 C11orf49Q9H6J7 331 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 GIN1Q9NXP7 522 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 MAPRE3Q9UPY8 281 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 ANGPT4Q9Y264 503 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 H3BN98 237 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 AGRPO00253 132 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 TPST2O60704 377 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 GASTP01350 101 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 STATHP02808 62 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 IGFBP1P08833 259 aaPredicted RBP13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 TGM1P22735 817 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 CNR2P34972 360 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 HNRNPFP52597 415 aaKnown RBP13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 CDC42P60953 191 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 KCNC4Q03721 635 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 TPRG1LQ5T0D9 272 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 TMIGD1Q6UXZ0 262 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 GRASPQ7Z6J2 395 aaPredicted RBP13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 WDR36Q8NI36 951 aaKnown RBP13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 POF1BQ8WVV4 589 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 ZFYVE19Q96K21 471 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 ACER3Q9NUN7 267 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 HCN4Q9Y3Q4 1203 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 IFNA14P01570 189 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 IFNW1P05000 195 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 PTGER1P34995 402 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 MANFP55145 182 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 DSTNP60981 165 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 FADDQ13158 208 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 TBCEQ15813 527 aaPredicted RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 TSTQ16762 297 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 DEF8Q6ZN54 512 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 RASGRP3Q8IV61 690 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 CPA6Q8N4T0 437 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 OR5AR1Q8NGP9 310 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 EXOSC8Q96B26 276 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 F2RL3Q96RI0 385 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 KCNS3Q9BQ31 491 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 CCDC88CQ9P219 2028 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 PNLIPRP1P54315 467 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 TPTEP56180 551 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 C21orf58P58505 322 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 SFSWAPQ12872 951 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 LRRC26Q2I0M4 334 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 CAMKMTQ7Z624 323 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 ADCK2Q7Z695 626 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 C11orf74Q86VG3 221 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 ZCCHC2Q9C0B9 1178 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 CXorf36Q9H7Y0 433 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 C5orf42Q9H799 3197 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 KRT75O95678 551 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 CKMT1AP12532 417 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 FCHO2Q0JRZ9 810 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 CNTN1Q12860 1018 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 COL9A2Q14055 689 aaPredicted RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 FNDC3BQ53EP0 1204 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 PRAMEF14Q5SWL7 426 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 PRAMEF13Q5VWM6 474 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 FAM71E1Q6IPT2 247 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 USP43Q70EL4 1123 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 OLIG3Q7RTU3 272 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 SLC46A3Q7Z3Q1 461 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 MRPL43Q8N983 215 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 OR4C15Q8NGM1 316 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 METTL2AQ96IZ6 378 aaKnown RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 NMNAT1Q9HAN9 279 aaPredicted RBP13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 TAC3Q9UHF0 121 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 PCM1Q15154 2024 aa13.41□□□□□ -0.26
ATP2C1-201ENST00000328560 FEZF1A0PJY2 475 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 OR10H3O60404 316 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 CHRM5P08912 532 aaPredicted RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 ALOX5P09917 674 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 RGS6P49758 472 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 ZNF630Q2M218 657 aaPredicted RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 NUS1Q96E22 293 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 DTD2Q96FN9 168 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 SIGLEC11Q96RL6 698 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 MMP27Q9H306 513 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 RC3H2Q9HBD1 1191 aaKnown RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 CTPS2Q9NRF8 586 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 DNAJC27Q9NZQ0 273 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 ENPP4Q9Y6X5 453 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 TRBV4-1A0A0J9YWV2 114 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 LINC00854A0A1B0GVQ3 168 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 METTL15A6NJ78 407 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 A8MU76 341 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 ZW10O43264 779 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 AQP9O43315 295 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 MOSPD3O75425 235 aa13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 EIF2DP41214 584 aaKnown RBP13.4□□□□□ -0.26
ATP2C1-201ENST00000328560 MAPK12P53778 367 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms