RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 PDPRQ8NCN5 879 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 DAZLQ92904 295 aaKnown RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 UBE2E3Q969T4 207 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 KCNC2Q96PR1 638 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 TMEM79Q9BSE2 394 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 LYRM4Q9HD34 91 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 SAYSD1Q9NPB0 183 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 TIMMDC1Q9NPL8 285 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 PRDM7Q9NQW5 492 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 PNO1Q9NRX1 252 aaKnown RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 VTI1BQ9UEU0 232 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 FBXW2Q9UKT8 454 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 DAPP1Q9UN19 280 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ASB1Q9Y576 335 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 TCRBV9S1A1TA0A576 114 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 FAM159BA6NKW6 160 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CXorf49A8MYA2 514 aaPredicted RBP16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 PEX1O43933 1283 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 ANKRD17O75179 2603 aaKnown RBP16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 TBX6O95947 436 aaPredicted RBP16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 S100BP04271 92 aaPredicted RBP16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 SERPINB1P30740 379 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 SPRP35270 261 aaPredicted RBP16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 SSR4P51571 173 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 LIM2P55344 173 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 RAB10P61026 200 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CAV1Q03135 178 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 DOC2AQ14183 400 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 TMEM35AQ53FP2 167 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 GRTP1Q5TC63 336 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 VN1R5Q7Z5H4 357 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 MORN4Q8NDC4 146 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 STAG3L4Q8TBR4 150 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 AGAP11Q8TF27 550 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 MTFMTQ96DP5 389 aaKnown RBP16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 TBCDQ9BTW9 1192 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CD244Q9BZW8 370 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 COPS7BQ9H9Q2 264 aaPredicted RBP16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CAB39LQ9H9S4 337 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CD274Q9NZQ7 290 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CLCA3PQ9Y6N3 262 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CACNA1CQ13936 2221 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 FBN2P35556 2912 aa16.49■□□□□ 0.23
PTPMT1-201ENST00000326656 CCDC189A1A4V9 331 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 TFECO14948 347 aaPredicted RBP16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 PTGS2P35354 604 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 HSPA7P48741 367 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 MEOX1P50221 254 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 IRF8Q02556 426 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 BIKQ13323 160 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 BMPR2Q13873 1038 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 SERTAD2Q14140 314 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 OR4D1Q15615 310 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 LRRC70Q7Z2Q7 622 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 SPATA6LQ8N4H0 392 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 SNX31Q8N9S9 440 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 SPATA4Q8NEY3 305 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 OR8K3Q8NH51 312 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 OR14A16Q8NHC5 309 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 NCLNQ969V3 563 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 PHF12Q96QT6 1004 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 DMRTA2Q96SC8 542 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 KCMF1Q9P0J7 381 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 MYOTQ9UBF9 498 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 ZNF223Q9UK11 482 aaPredicted RBP16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 RNF112Q9ULX5 631 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 SPACA6W5XKT8 324 aa16.48■□□□□ 0.23
PTPMT1-201ENST00000326656 A0A0G2JN53 185 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 TGFBR3LH3BV60 316 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 ADAM10O14672 748 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 PHGDHO43175 533 aaKnown RBP16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 PRAMEF4O60810 478 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 PIAS1O75925 651 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 TUBB4AP04350 444 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 HNRNPFP52597 415 aaKnown RBP16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 STX4Q12846 297 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 PRAMEF9Q5VWM5 478 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 ARHGAP11AQ6P4F7 1023 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 PAOXQ6QHF9 649 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 HSDL2Q6YN16 418 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 CAPN12Q6ZSI9 719 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 CHSY3Q70JA7 882 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 CCDC91Q7Z6B0 441 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 TMEM52Q8NDY8 209 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 FAM57AQ8TBR7 257 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 F2RL3Q96RI0 385 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 NMRAL1Q9HBL8 299 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 PLSCR2Q9NRY7 297 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 RYDENQ9NUL5 291 aaKnown RBP16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 ADGRE2Q9UHX3 823 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 ERVK-11Q9UQG0 969 aa16.47■□□□□ 0.23
PTPMT1-201ENST00000326656 TMEM200CA6NKL6 621 aa16.46■□□□□ 0.23
PTPMT1-201ENST00000326656 C1QAP02745 245 aa16.46■□□□□ 0.23
PTPMT1-201ENST00000326656 IFNA16P05015 189 aa16.46■□□□□ 0.23
PTPMT1-201ENST00000326656 CRABP2P29373 138 aa16.46■□□□□ 0.23
PTPMT1-201ENST00000326656 PPP2R1BP30154 601 aa16.46■□□□□ 0.23
PTPMT1-201ENST00000326656 CHIT1Q13231 466 aa16.46■□□□□ 0.23
PTPMT1-201ENST00000326656 NAB1Q13506 487 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms