RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 PABPN1LA6NDY0 278 aaKnown RBP7.56□□□□□ -1.2
CCNC-201ENST00000326298 UBXN8O00124 270 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 CCNT2O60583 730 aaKnown RBP7.56□□□□□ -1.2
CCNC-201ENST00000326298 STK16O75716 305 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 OR2J2O76002 312 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 OR6B1O95007 311 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 CD46P15529 392 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 POU3F2P20265 443 aaPredicted RBP7.56□□□□□ -1.2
CCNC-201ENST00000326298 TRHRP34981 398 aaPredicted RBP7.56□□□□□ -1.2
CCNC-201ENST00000326298 CYB561P49447 251 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 MEOX1P50221 254 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 HLCSP50747 726 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 PER3P56645 1201 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 SLC7A5Q01650 507 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 SLC13A2Q13183 592 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 CHIT1Q13231 466 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 CMPK2Q5EBM0 449 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 Q6ZPB1 254 aaPredicted RBP7.56□□□□□ -1.2
CCNC-201ENST00000326298 CCDC25Q86WR0 208 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 CTAGE3PQ8IX95 158 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 CENPLQ8N0S6 344 aaPredicted RBP7.56□□□□□ -1.2
CCNC-201ENST00000326298 PPM1NQ8N819 430 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 SNX31Q8N9S9 440 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 FBF1Q8TES7 1133 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 ATOH8Q96SQ7 321 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 DEFB126Q9BYW3 111 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 POPDC3Q9HBV1 291 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 PRTFDC1Q9NRG1 225 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 DNAJC11Q9NVH1 559 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 CD274Q9NZQ7 290 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 WHRNQ9P202 907 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 DAPP1Q9UN19 280 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 MEMO1Q9Y316 297 aa7.56□□□□□ -1.2
CCNC-201ENST00000326298 A0A1B0GTH9 108 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 PSMD12O00232 456 aaPredicted RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 WWP2O00308 870 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 HNRNPRO43390 633 aaKnown RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 CLEC3AO75596 197 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ETHE1O95571 254 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 TGFB1P01137 390 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 STMN1P16949 149 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ZNF24P17028 368 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 TFEBP19484 476 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 PAFAH1B1P43034 410 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 RAB38P57729 211 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 RAB10P61026 200 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 AP2B1P63010 937 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ART3Q13508 389 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ZNF630Q2M218 657 aaPredicted RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 ZNF750Q32MQ0 723 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 EMC4Q5J8M3 183 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 TMEM178AQ8NBL3 297 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 PDPRQ8NCN5 879 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ZNF473Q8WTR7 871 aaKnown RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 KCTD4Q8WVF5 259 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 KIAA1191Q96A73 305 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 PPWD1Q96BP3 646 aaKnown RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 NXNL1Q96CM4 212 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 WDR34Q96EX3 536 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 TRIM8Q9BZR9 551 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 OR51B5Q9H339 312 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 PPIEQ9UNP9 301 aaKnown RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCNC-201ENST00000326298 CLGNO14967 610 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 PEX1O43933 1283 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 GP5P40197 560 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 SOX3P41225 446 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 MSH2P43246 934 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 TAS2R50P59544 299 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 STXBP1P61764 594 aaKnown RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 E2F2Q14209 437 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 PDK4Q16654 411 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 IL20RBQ6UXL0 311 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 SYT10Q6XYQ8 523 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 BNC2Q6ZN30 1099 aaPredicted RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 LGI4Q8N135 537 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 CYP4Z2PQ8N1L4 340 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ZNF808Q8N4W9 903 aaPredicted RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 TBC1D19Q8N5T2 526 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ACOT4Q8N9L9 421 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ANKRD9Q96BM1 317 aaPredicted RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 FAR2Q96K12 515 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 CPNE1Q99829 537 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 MS4A8Q9BY19 250 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 ALOXE3Q9BYJ1 711 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 CD244Q9BZW8 370 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 DEFB127Q9H1M4 99 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 SEMA4BQ9NPR2 832 aaPredicted RBP7.55□□□□□ -1.2
CCNC-201ENST00000326298 RNF112Q9ULX5 631 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 LIPGQ9Y5X9 500 aa7.55□□□□□ -1.2
CCNC-201ENST00000326298 INTS1Q8N201 2190 aaKnown RBP7.54□□□□□ -1.2
CCNC-201ENST00000326298 NCKAP5O14513 1909 aa7.54□□□□□ -1.2
CCNC-201ENST00000326298 MED12Q93074 2177 aa7.54□□□□□ -1.2
CCNC-201ENST00000326298 A0A1B0GTL3 188 aa7.54□□□□□ -1.2
CCNC-201ENST00000326298 ANKDD1BA6NHY2 528 aa7.54□□□□□ -1.2
CCNC-201ENST00000326298 B3GALT2O43825 422 aa7.54□□□□□ -1.2
CCNC-201ENST00000326298 FGF17O60258 216 aa7.54□□□□□ -1.2
CCNC-201ENST00000326298 CDC40O60508 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms