RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 PCDHGB6Q9Y5F9 930 aa12.54□□□□□ -0.4
CLGN-201ENST00000325617 FEZF1A0PJY2 475 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 TNFRSF21O75509 655 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 NPPBP16860 134 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 BMPR1AP36894 532 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 RACK1P63244 317 aaKnown RBP12.53□□□□□ -0.4
CLGN-201ENST00000325617 IFITM2Q01629 132 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 VEZF1Q14119 521 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 RSBN1Q5VWQ0 802 aaPredicted RBP12.53□□□□□ -0.4
CLGN-201ENST00000325617 LACC1Q8IV20 430 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 OR4C15Q8NGM1 316 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 IPCEF1Q8WWN9 437 aaPredicted RBP12.53□□□□□ -0.4
CLGN-201ENST00000325617 MYDGFQ969H8 173 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 AP2M1Q96CW1 435 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
CLGN-201ENST00000325617 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 SLC6A16Q9GZN6 736 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 TP63Q9H3D4 680 aaPredicted RBP12.53□□□□□ -0.4
CLGN-201ENST00000325617 ERVW-1Q9UQF0 538 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 GLOD5A6NK44 160 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 SERPIND1P05546 499 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 ACRP10323 421 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 TYRP14679 529 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 PRPH2P23942 346 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 PSMB5P28074 263 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 GRK3P35626 688 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 RPS19P39019 145 aaKnown RBP12.53□□□□□ -0.4
CLGN-201ENST00000325617 RECQLP46063 649 aaPredicted RBP12.53□□□□□ -0.4
CLGN-201ENST00000325617 TM4SF4P48230 202 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 PLEKHS1Q5SXH7 462 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 NRARPQ7Z6K4 114 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLGN-201ENST00000325617 SLC43A3Q8NBI5 491 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 C7orf57Q8NEG2 295 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 OR4D11Q8NGI4 311 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 DNAJB8Q8NHS0 232 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 C16orf78Q8WTQ4 265 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 STARD8Q92502 1023 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 LYSMD1Q96S90 227 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 GABARAPL3Q9BY60 117 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 MMP27Q9H306 513 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 CXorf36Q9H7Y0 433 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 ANKRA2Q9H9E1 313 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 ZNF556Q9HAH1 456 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 C1GALT1Q9NS00 363 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 SLC25A13Q9UJS0 675 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 HSPE1-MOB4S4R3N1 261 aa12.53□□□□□ -0.4
CLGN-201ENST00000325617 DNAJB5O75953 348 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 GABRB1P18505 474 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 PCGF2P35227 344 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 AP1S2P56377 157 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 CSTF3Q12996 717 aaKnown RBP12.52□□□□□ -0.4
CLGN-201ENST00000325617 FADDQ13158 208 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 NFE2L1Q14494 772 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 GRHL2Q6ISB3 625 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 MED27Q6P2C8 311 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 USP43Q70EL4 1123 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 COMTD1Q86VU5 262 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 AMER2Q8N7J2 671 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 ZFP41Q8N8Y5 198 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 AMER3Q8N944 861 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 GPR151Q8TDV0 419 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 DEFB118Q96PH6 123 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 BARHL1Q9BZE3 327 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 REEP4Q9H6H4 257 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 KCNK12Q9HB15 430 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 SPG21Q9NZD8 308 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 COL4A6Q14031 1691 aa12.52□□□□□ -0.4
CLGN-201ENST00000325617 WASH3PC4AMC7 463 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 SLCO2B1O94956 709 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 MFN2O95140 757 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 CATP04040 527 aaKnown RBP12.52□□□□□ -0.41
CLGN-201ENST00000325617 CSF2P04141 144 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 GSTM1P09488 218 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 MPC1LP0DKB6 136 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 RAB33AQ14088 237 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 TBCEQ15813 527 aaPredicted RBP12.52□□□□□ -0.41
CLGN-201ENST00000325617 LAX1Q8IWV1 398 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 HORMAD2Q8N7B1 307 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 DTX3Q8N9I9 347 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 VN1R2Q8NFZ6 395 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 OR5D16Q8NGK9 328 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 F2RL3Q96RI0 385 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 MMP28Q9H239 520 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 PADI2Q9Y2J8 665 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 PCDHGA3Q9Y5H0 932 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 KCNE2Q9Y6J6 123 aa12.52□□□□□ -0.41
CLGN-201ENST00000325617 A0A1W2PRB8 838 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 LATO43561 262 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 LRG1P02750 347 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 C8AP07357 584 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 ALOX5P09917 674 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 CTSAP10619 480 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 TNFSF8P32971 234 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 CASP3P42574 277 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 UGT2B15P54855 530 aa12.51□□□□□ -0.41
CLGN-201ENST00000325617 PIN1Q13526 163 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms