RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SGPP1Q9BX95 441 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
COL9A1-201ENST00000320755 SACM1LQ9NTJ5 587 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 PLXND1Q9Y4D7 1925 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 C5orf58C9J3I9 102 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 LILRB5O75023 590 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 SOX14O95416 240 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 GASTP01350 101 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 PTGER1P34995 402 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 CTNNB1P35222 781 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 EIF2B2P49770 351 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 MANFP55145 182 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 RPS3AP61247 264 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 CNTN1Q12860 1018 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 C11orf96Q7Z7L8 435 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 LAS2Q8IYD9 372 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 METTL4Q8N3J2 472 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 POF1BQ8WVV4 589 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 GEMIN6Q8WXD5 167 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 HTRA1Q92743 480 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 PAWRQ96IZ0 340 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 SIGLEC11Q96RL6 698 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 PIP5K1AQ99755 562 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 BCL7BQ9BQE9 202 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 NLNQ9BYT8 704 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 C11orf16Q9NQ32 467 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 FBXO8Q9NRD0 319 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 DNTTP04053 509 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 IGFBP1P08833 259 aaPredicted RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 ITGA2P17301 1181 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 PSMB5P28074 263 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 DSTNP60981 165 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 FCHO2Q0JRZ9 810 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 INAVAQ3KP66 663 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 MMAAQ8IVH4 418 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 ZNF557Q8N988 423 aaPredicted RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 PLA2G15Q8NCC3 412 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 B3GNT7Q8NFL0 401 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 GOT1L1Q8NHS2 421 aaPredicted RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 EXOSC8Q96B26 276 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 OTUB1Q96FW1 271 aaPredicted RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 Q96MT0 163 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 ZDHHC5Q9C0B5 715 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 CUEDC1Q9NWM3 386 aaPredicted RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 OSGIN1Q9UJX0 560 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 ANGPT4Q9Y264 503 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 MRPS23Q9Y3D9 190 aaKnown RBP16.62■□□□□ 0.25
COL9A1-201ENST00000320755 SNX11Q9Y5W9 270 aa16.62■□□□□ 0.25
COL9A1-201ENST00000320755 CLDN24A6NM45 220 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 TBX1O43435 398 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CCNB2O95067 398 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 TPP2P29144 1249 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 GRK3P35626 688 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 ZNF404Q494X3 552 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 SPDYE7PQ495Y7 208 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 PTCHD4Q6ZW05 846 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 VN1R5Q7Z5H4 357 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 ZBTB8BQ8NAP8 495 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CXorf40BQ96DE9 158 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CENPOQ9BU64 300 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 MYNNQ9NPC7 610 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CXXC1Q9P0U4 656 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 HCN4Q9Y3Q4 1203 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 PLXNA2O75051 1894 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 MYO10Q9HD67 2058 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 TIMP1P01033 207 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 IFNW1P05000 195 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 LINC00271P0C7V0 271 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 ADORA3P0DMS8 318 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 MAPK12P53778 367 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CSNK2BP67870 215 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 FADDQ13158 208 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 ZNF630Q2M218 657 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 OLIG3Q7RTU3 272 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CADM3Q8N126 398 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 HORMAD2Q8N7B1 307 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 OR5M11Q96RB7 305 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 FAM83CQ9BQN1 747 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 SLAMF7Q9NQ25 335 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 NFKBIL1Q9UBC1 381 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 WASHC1A8K0Z3 465 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 H7BY64 318 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 TPST2O60704 377 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 KRT75O95678 551 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 IFNA14P01570 189 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 PRNPP04156 253 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CISD3P0C7P0 127 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 PTX3P26022 381 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 CNR2P34972 360 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 RBBP4Q09028 425 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 COL9A2Q14055 689 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 C10orf62Q5T681 223 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 WASH2PQ6VEQ5 465 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 KIAA0907Q7Z7F0 614 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 NRSN1Q8IZ57 195 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 C12orf76Q8N812 135 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-201ENST00000320755 UCN3Q969E3 161 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 PRAP1Q96NZ9 151 aa16.61■□□□□ 0.25
COL9A1-201ENST00000320755 SLC23A2Q9UGH3 650 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms