RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZNF300Q96RE9 604 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 MYOCQ99972 504 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 SLC17A9Q9BYT1 436 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 AASDHPPTQ9NRN7 309 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 ACOXLQ9NUZ1 547 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 LEF1Q9UJU2 399 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 OSGIN1Q9UJX0 560 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 ANAPC2Q9UJX6 822 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 PLEKHM1Q9Y4G2 1056 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 SNX5Q9Y5X3 404 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 TRIM77I1YAP6 450 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 IFRD1O00458 451 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 LATO43561 262 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 ETHE1O95571 254 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 CEACAM5P06731 702 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 DRD1P21728 446 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 SHMT2P34897 504 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 PTGS2P35354 604 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 ESCO2Q56NI9 601 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 TTC23Q5W5X9 447 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 SDE2Q6IQ49 451 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 KIAA1161Q6NSJ0 714 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 GDPD3Q7L5L3 318 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 PAGE2Q7Z2X7 111 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 KCTD20Q7Z5Y7 419 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 HORMAD1Q86X24 394 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 UBALD2Q8IYN6 164 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 DPP10Q8N608 796 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 CMTM7Q96FZ5 175 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 RNF170Q96K19 258 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 FCRL1Q96LA6 429 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 MRGPRX1Q96LB2 322 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 TMEM74Q96NL1 305 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 SPNS1Q9H2V7 528 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 RPRD1BQ9NQG5 326 aaKnown RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 DDX28Q9NUL7 540 aaKnown RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 USP22Q9UPT9 525 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 CFAP20Q9Y6A4 193 aaKnown RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 AGAP5A6NIR3 686 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 PRR19A6NJB7 356 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 H0YIV9 168 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 LDLRP01130 860 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 AMD1P17707 334 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 SDC1P18827 310 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 CD72P21854 359 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 CASP2P42575 452 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 DEFA1P59665 94 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 DEFA3P59666 94 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 FOXM1Q08050 763 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 SIGLEC14Q08ET2 396 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 RPA4Q13156 261 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 MAD2L1Q13257 205 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-201ENST00000317677 SPANXN4Q5MJ08 99 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 ZNF438Q7Z4V0 828 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 SYTL1Q8IYJ3 562 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 C8orf59Q8N0T1 100 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-201ENST00000317677 FBXL6Q8N531 539 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 LILRB1Q8NHL6 650 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-201ENST00000317677 RPLP0P6Q8NHW5 317 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 NDNFQ8TB73 568 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 DNAJB14Q8TBM8 379 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 KCTD14Q9BQ13 255 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-201ENST00000317677 ASPSCR1Q9BZE9 553 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 CLMPQ9H6B4 373 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 C8orf33Q9H7E9 229 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-201ENST00000317677 FBRSQ9HAH7 460 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 SPATA6Q9NWH7 488 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-201ENST00000317677 ADPRHL2Q9NX46 363 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 PPT2Q9UMR5 302 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 ASF1AQ9Y294 204 aa12.48□□□□□ -0.41
CPNE1-201ENST00000317677 M0R296 226 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 B3GALT4O96024 378 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 HPRP00739 348 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 APOA1P02647 267 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 YES1P07947 543 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 NDUFV2P19404 249 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 ALDH3A2P51648 485 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PNLIPRP1P54315 467 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 OR2B6P58173 313 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 B2MP61769 119 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 GPLD1P80108 840 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 PRKCDQ05655 676 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 EPS8Q12929 822 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 FADDQ13158 208 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 CCINQ13939 588 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 SF1Q15637 639 aaKnown RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TMPRSS11BQ86T26 416 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 SPPL2CQ8IUH8 684 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 METTL4Q8N3J2 472 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 CHDHQ8NE62 594 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 OR5H6Q8NGV6 325 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-201ENST00000317677 DNASE1L2Q92874 299 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 WDR34Q96EX3 536 aa12.47□□□□□ -0.41
CPNE1-201ENST00000317677 C11orf24Q96F05 449 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms