RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CLCA3PQ9Y6N3 262 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 SCN2AQ99250 2005 aa16.58■□□□□ 0.25
TPM1-203ENST00000317516 UNC79Q9P2D8 2635 aa16.58■□□□□ 0.25
TPM1-203ENST00000317516 TRBV11-1A0A0K0K1C0 115 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 NPIPA5E9PKD4 350 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 CCL21O00585 134 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 CYR61O00622 381 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 SLC19A2O60779 497 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 ZFAND5O76080 213 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 URI1O94763 535 aaPredicted RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 TBX6O95947 436 aaPredicted RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 IFNA16P05015 189 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 CD22P20273 847 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 DCTP40126 519 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 CA7P43166 264 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 SRSF11Q05519 484 aaKnown RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 PCDH1Q08174 1060 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 STX4Q12846 297 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 DLG1Q12959 904 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 BMPR2Q13873 1038 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 E2F2Q14209 437 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 ACAP2Q15057 778 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 ELAVL1Q15717 326 aaKnown RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 WHAMMP3Q1A5X7 153 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 AP5B1Q2VPB7 878 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 KLC3Q6P597 504 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 TMEM156Q8N614 296 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 APCDD1LQ8NCL9 501 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 ZNF473Q8WTR7 871 aaKnown RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 UBTD2Q8WUN7 234 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 DAZLQ92904 295 aaKnown RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 MAGED4Q96JG8 741 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 GPR137Q96N19 417 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 CENPKQ9BS16 269 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 NPIPA1Q9UND3 350 aa16.58■□□□□ 0.24
TPM1-203ENST00000317516 KLF13Q9Y2Y9 288 aaPredicted RBP16.58■□□□□ 0.24
TPM1-203ENST00000317516 ESYT3A0FGR9 886 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 KLRC4-KLRK1H3BQV0 150 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 UBXN8O00124 270 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 NME2P1O60361 137 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 C2P06681 752 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 PCNAP12004 261 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 EPORP19235 508 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 NME2P22392 152 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 CERS1P27544 350 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 SERTAD2Q14140 314 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 UAP1Q16222 522 aaPredicted RBP16.57■□□□□ 0.24
TPM1-203ENST00000317516 ZNF468Q5VIY5 522 aaPredicted RBP16.57■□□□□ 0.24
TPM1-203ENST00000317516 ZNF787Q6DD87 383 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 LAS2Q8IYD9 372 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 POGLUT1Q8NBL1 392 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 KCTD4Q8WVF5 259 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 MRRFQ96E11 262 aaKnown RBP16.57■□□□□ 0.24
TPM1-203ENST00000317516 CMTM7Q96FZ5 175 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 FRMD6Q96NE9 622 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 MS4A8Q9BY19 250 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 ALOXE3Q9BYJ1 711 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 ZDHHC18Q9NUE0 388 aa16.57■□□□□ 0.24
TPM1-203ENST00000317516 YARS2Q9Y2Z4 477 aaKnown RBP16.57■□□□□ 0.24
TPM1-203ENST00000317516 ASNA1O43681 348 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 TGFB1P01137 390 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 ESRRAP11474 423 aaPredicted RBP16.56■□□□□ 0.24
TPM1-203ENST00000317516 GFAPP14136 432 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 TNNI3P19429 210 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 ATP5A1P25705 553 aaKnown RBP16.56■□□□□ 0.24
TPM1-203ENST00000317516 TYK2P29597 1187 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 GMPRP36959 345 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 HNRNPFP52597 415 aaKnown RBP16.56■□□□□ 0.24
TPM1-203ENST00000317516 ADNP2Q6IQ32 1131 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 RPTNQ6XPR3 784 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 CLNKQ7Z7G1 428 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 ZGRF1Q86YA3 2104 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 SPPL2CQ8IUH8 684 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 TEX9Q8N6V9 391 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 ACOT4Q8N9L9 421 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 TMEM52Q8NDY8 209 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 OR7G3Q8NG95 312 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 NCLNQ969V3 563 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 SNX15Q9NRS6 342 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 MS4A12Q9NXJ0 267 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 KCMF1Q9P0J7 381 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 VTI1BQ9UEU0 232 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 ASB1Q9Y576 335 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 PCDHGA11Q9Y5H2 935 aa16.56■□□□□ 0.24
TPM1-203ENST00000317516 TNPO3Q9Y5L0 923 aaKnown RBP16.56■□□□□ 0.24
TPM1-203ENST00000317516 A0A096LPK6 155 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 ITGA10O75578 1167 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 KLHL2O95198 593 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 ZNF24P17028 368 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 HIST1H1TP22492 207 aaPredicted RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 PIK3CBP42338 1070 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 SSR2P43308 183 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 SSR4P51571 173 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 GPR143P51810 404 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 ALDH18A1P54886 795 aaKnown RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 PHEXP78562 749 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 ART3Q13508 389 aa16.55■□□□□ 0.24
TPM1-203ENST00000317516 NAA30Q147X3 362 aaPredicted RBP16.55■□□□□ 0.24
TPM1-203ENST00000317516 PFKFB4Q16877 469 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms