RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 J3KTA2 159 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 QSOX1O00391 747 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 UGT2B17O75795 530 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 CTSCP53634 463 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 UGT2B15P54855 530 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 SIGLEC14Q08ET2 396 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 TTC33Q6PID6 262 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF765Q7L2R6 523 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 NPAS3Q8IXF0 933 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 FAM26EQ8N5C1 309 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 AMER3Q8N944 861 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 FBXO32Q969P5 355 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF524Q96C55 264 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 TM4SF19Q96DZ7 209 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 TRNT1Q96Q11 434 aaKnown RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 FAM129BQ96TA1 746 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 PKP4Q99569 1192 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 ARHGDIGQ99819 225 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 PRSS27Q9BQR3 290 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 REXO4Q9GZR2 422 aaKnown RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 BPIFA1Q9NP55 256 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 CLDN9O95484 217 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 GASTP01350 101 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 C8GP07360 202 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 GALP22466 123 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 CD79BP40259 229 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 NSG1P42857 185 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 E2F1Q01094 437 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 CBX3Q13185 183 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 BAK1Q16611 211 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 CCNJQ5T5M9 372 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 C1orf94Q6P1W5 598 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 RNF135Q8IUD6 432 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 SFTPA1Q8IWL2 248 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 THEM5Q8N1Q8 247 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 OR7G3Q8NG95 312 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 QRFPRQ96P65 431 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 BCL2L10Q9HD36 194 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 SARS2Q9NP81 518 aaKnown RBP7.44□□□□□ -1.22
CNOT4-201ENST00000315544 B3GAT2Q9NPZ5 323 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 DMRT3Q9NQL9 472 aa7.44□□□□□ -1.22
CNOT4-201ENST00000315544 RFXANKO14593 260 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PLOD3O60568 738 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 SNX2O60749 519 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 FAM20BO75063 409 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 SLC25A14O95258 325 aaPredicted RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CASP3P42574 277 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 GSSP48637 474 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 VBP1P61758 197 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PSPHP78330 225 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TSPY1Q01534 308 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 DOC2AQ14183 400 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TMEM236Q5W0B7 351 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TMC5Q6UXY8 1006 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ARL10Q8N8L6 244 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 FNDC5Q8NAU1 212 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CHST14Q8NCH0 376 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 BPIFB6Q8NFQ5 453 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 OR2AP1Q8NGE2 309 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF480Q8WV37 535 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 IPCEF1Q8WWN9 437 aaPredicted RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 STARD8Q92502 1023 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 NEIL2Q969S2 332 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 SCYL1Q96KG9 808 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 SAP130Q9H0E3 1048 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ZMIZ1Q9ULJ6 1067 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 G3BP2Q9UN86 482 aaKnown RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TESMINQ9Y4I5 508 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 K7ESM1 405 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 DVL2O14641 736 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 HOXC11O43248 304 aaPredicted RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CSO75390 466 aaKnown RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CST1P01037 141 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PROS1P07225 676 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TRAPPC2P0DI81 140 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TRAPPC2BP0DI82 140 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ACADMP11310 421 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 LAMP2P13473 410 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PRPS1L1P21108 318 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CSTF2P33240 577 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 OMPP47874 163 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 MGAT2Q10469 447 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CCINQ13939 588 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 NR1D2Q14995 579 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 RFX4Q33E94 735 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PTCHD3Q3KNS1 767 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ZMAT1Q5H9K5 638 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 AADACL4Q5VUY2 407 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TTC23Q5W5X9 447 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 IL27RAQ6UWB1 636 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TMEM91Q6ZNR0 172 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 MED25Q71SY5 747 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF786Q8N393 782 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 OR52N2Q8NGI0 321 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ITFG1Q8TB96 612 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PLA2G2FQ9BZM2 168 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms