RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ABCB1P08183 1280 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 HBQ1P09105 142 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PABPC4LP0CB38 370 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 ANPEPP15144 967 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 KCNC1P48547 511 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SLC7A2P52569 658 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PSMD4P55036 377 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 BPIFB3P59826 476 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SLC25A3Q00325 362 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 C2orf80Q0P641 193 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PTPRCAPQ14761 206 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 FAM189A2Q15884 450 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 LEXMQ3ZCV2 418 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PTCRAQ6ISU1 281 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 GALNT18Q6P9A2 607 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SYCE2Q6PIF2 218 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 TMEM26Q6ZUK4 368 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 LARP4Q71RC2 724 aaKnown RBP eCLIP5.76□□□□□ -1.498e-7■■■□□ 16.6
SEC22A-201ENST00000309934 SYT13Q7L8C5 426 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 GPR135Q8IZ08 494 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 CLEC4FQ8N1N0 589 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 CADM4Q8NFZ8 388 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MAFAQ8NHW3 353 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 CAMK1GQ96NX5 476 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 KCNC2Q96PR1 638 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 OR52B2Q96RD2 323 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SLC38A3Q99624 504 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SIAEQ9HAT2 523 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PRMT8Q9NR22 394 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 LIMD1Q9UGP4 676 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MED16Q9Y2X0 877 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PCDHGA1Q9Y5H4 931 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 DNAJC15Q9Y5T4 150 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 CENPFP49454 3210 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 IRGMA1A4Y4 181 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 TARM1B6A8C7 271 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MEN1O00255 615 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 OR1F1O43749 312 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 GLAP06280 429 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MTHFD1P11586 935 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 CDK4P11802 303 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SLC6A2P23975 617 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MPIP34949 423 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 LIMK1P53667 647 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 TBPL1P62380 186 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 EEF1A1P68104 462 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MEF2AQ02078 507 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 EEF1A2Q05639 463 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 CHAF1BQ13112 559 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 GFOD2Q3B7J2 385 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 ZNF829Q3KNS6 432 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 EIPR1Q53HC9 387 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 FAM209BQ5JX69 171 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 EEF1A1P5Q5VTE0 462 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 YOD1Q5VVQ6 348 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 TTC33Q6PID6 262 aaPredicted RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PARM1Q6UWI2 310 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 GK5Q6ZS86 529 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 ZBTB49Q6ZSB9 765 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PARGQ86W56 976 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 AMIGO1Q86WK6 493 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 ZDHHC13Q8IUH4 622 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 ERI1Q8IV48 349 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 GALNT12Q8IXK2 581 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PQLC1Q8N2U9 271 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 METTL4Q8N3J2 472 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SMRP1Q8NCR6 262 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 OR8H1Q8NGG4 311 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SORCS1Q8WY21 1168 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MYDGFQ969H8 173 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 LRCH3Q96II8 777 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 MOGAT1Q96PD6 335 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PFDN5Q99471 154 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PKP4Q99569 1192 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 APOL4Q9BPW4 351 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 EBF4Q9BQW3 602 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 YTHDF1Q9BYJ9 559 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 C12orf65Q9H3J6 166 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 LMAN1LQ9HAT1 526 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 IL1RL2Q9HB29 575 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 SACM1LQ9NTJ5 587 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 CNOT11Q9UKZ1 510 aaKnown RBP5.76□□□□□ -1.49
SEC22A-201ENST00000309934 KIAA1671Q9BY89 1806 aa5.76□□□□□ -1.49
SEC22A-201ENST00000309934 PLD2O14939 933 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 SCAMP1O15126 338 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 SHOXO15266 292 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 CD160O95971 181 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 PROS1P07225 676 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 SYPP08247 313 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 CDH1P12830 882 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 CSNK2A2P19784 350 aaPredicted RBP5.75□□□□□ -1.49
SEC22A-201ENST00000309934 BDKRB1P46663 353 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 CARD18P57730 90 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 GMFBP60983 142 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 SRP54P61011 504 aaKnown RBP5.75□□□□□ -1.49
SEC22A-201ENST00000309934 RCAN2Q14206 197 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 FAM76BQ5HYJ3 339 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 OR52E8Q6IFG1 317 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 ETFRF1Q6IPR1 90 aa5.75□□□□□ -1.49
SEC22A-201ENST00000309934 SBSNQ6UWP8 590 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms