RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZNF717Q9BY31 904 aaPredicted RBP10.68□□□□□ -0.7
PTPN7-201ENST00000309017 MIEF1Q9NQG6 463 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 ASAH2Q9NR71 780 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 SLC45A1Q9Y2W3 748 aa10.68□□□□□ -0.7
PTPN7-201ENST00000309017 TDRD15B5MCY1 1934 aaKnown RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 KCNE1BA0A087WTH5 132 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 NPIPB15A6NHN6 443 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 B4DXG7 233 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 CASKO14936 926 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 TLX2O43763 284 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 NOS1APO75052 506 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 PSIP1O75475 530 aaKnown RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ASGR1P07306 291 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 PCSK2P16519 638 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ATF6P18850 670 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ERP29P30040 261 aaKnown RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 XKP51811 444 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 TATDN3Q17R31 274 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 MORN1Q5T089 497 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 CELF5Q8N6W0 485 aaKnown RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 DEDD2Q8WXF8 326 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 CIDECQ96AQ7 238 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 UCK2Q9BZX2 261 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 POLR2J3Q9H1A7 115 aaKnown RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 NLKQ9UBE8 527 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 Q9Y3F1 56 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 RPL36Q9Y3U8 105 aaKnown RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 GBF1Q92538 1859 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ZNF670-ZNF695F2Z2N8 137 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 CA12O43570 354 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 FZD6O60353 706 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 OR2B3O76000 313 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 HOXC8P31273 242 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 OR1D2P34982 312 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 GPC1P35052 558 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ALDH9A1P49189 494 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 CAV3P56539 151 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 MC1RQ01726 317 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ZXDCQ2QGD7 858 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 RTP2Q5QGT7 225 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ATAT1Q5SQI0 421 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 DCST1Q5T197 706 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 TNFAIP8L2Q6P589 184 aaPredicted RBP10.67□□□□□ -0.7
PTPN7-201ENST00000309017 LAPTM4BQ86VI4 370 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 CCDC28AQ8IWP9 274 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 APCDD1Q8J025 514 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ASB11Q8WXH4 323 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ACER3Q9NUN7 267 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 HCSTQ9UBK5 93 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 BTNL2Q9UIR0 455 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ENPP4Q9Y6X5 453 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ZNF840PA6NDX5 716 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 SMLR1H3BR10 107 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 PRKAR1AP10644 381 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 SDC2P34741 201 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 MAP2K3P46734 347 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 WSCD2Q2TBF2 565 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 SPDYE7PQ495Y7 208 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 LIPJQ5W064 366 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 SDE2Q6IQ49 451 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 FUT10Q6P4F1 479 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 XKRXQ6PP77 449 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 USP45Q70EL2 814 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 GLCCI1Q86VQ1 547 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 NLRP8Q86W28 1048 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 IQCF1Q8N6M8 205 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 CLIP3Q96DZ5 547 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 KCTD7Q96MP8 289 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 LRFN2Q9ULH4 789 aa10.67□□□□□ -0.7
PTPN7-201ENST00000309017 ANKDD1BA6NHY2 528 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 MEN1O00255 615 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 LZTS3O60299 673 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-201ENST00000309017 ETHE1O95571 254 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 ADRA2AP08913 450 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 CSF3P09919 207 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 NR2F6P10588 404 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 GABRB1P18505 474 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 IDSP22304 550 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 GATMP50440 423 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-201ENST00000309017 P2RX3P56373 397 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 AP1S2P56377 157 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 DSC1Q08554 894 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 TARDBPQ13148 414 aaKnown RBP eCLIP10.66□□□□□ -0.7
PTPN7-201ENST00000309017 HEPACAMQ14CZ8 416 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 Q5BKY6 102 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 IER5LQ5T953 404 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 TSEN54Q7Z6J9 526 aaKnown RBP10.66□□□□□ -0.7
PTPN7-201ENST00000309017 OR8H1Q8NGG4 311 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 HUS1BQ8NHY5 278 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 FOXJ1Q92949 421 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 TMEM159Q96B96 161 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 TRMT61AQ96FX7 289 aaKnown RBP10.66□□□□□ -0.7
PTPN7-201ENST00000309017 MAGEB10Q96LZ2 347 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-201ENST00000309017 RIPOR3Q96MK2 946 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 NELL2Q99435 816 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 HDHD2Q9H0R4 259 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 ZDHHC6Q9H6R6 413 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 GSTK1Q9Y2Q3 226 aa10.66□□□□□ -0.7
PTPN7-201ENST00000309017 SNX11Q9Y5W9 270 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms