RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SDR16C5Q8N3Y7 309 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 LGR4Q9BXB1 951 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 GPN2Q9H9Y4 310 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 DAPK2Q9UIK4 370 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PGRP06401 933 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 ERCC1P07992 297 aaPredicted RBP10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 AOC1P19801 751 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 ST3GAL3Q11203 375 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 RCAN2Q14206 197 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 IGDCC3Q8IVU1 814 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 CLIP4Q8N3C7 705 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 PNLDC1Q8NA58 520 aaKnown RBP10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 TM9SF4Q92544 642 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 SLCO2A1Q92959 643 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 MPP4Q96JB8 637 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 C1QTNF1Q9BXJ1 281 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 SMURF2Q9HAU4 748 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 BRF2Q9HAW0 419 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 GLS2Q9UI32 602 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 THSD7AQ9UPZ6 1657 aa10.27□□□□□ -0.76
SYNPO2-201ENST00000307142 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 H3BSH0 61 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 TLR4O00206 839 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 BCAS2O75934 225 aaPredicted RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 CD2P06729 351 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 GPIP06744 558 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 EMP2P54851 167 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 PDK3Q15120 406 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 DUS1LQ6P1R4 473 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 IKBIPQ70UQ0 350 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 GAREM2Q75VX8 874 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 HDDC2Q7Z4H3 204 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 GALNT12Q8IXK2 581 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 RBM12BQ8IXT5 1001 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 PGAP3Q96FM1 320 aaPredicted RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 CNDP2Q96KP4 475 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 CD180Q99467 661 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 COMMD9Q9P000 198 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 EFCAB9A8MZ26 197 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 YKT6O15498 198 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 THRBP10828 461 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 SCRN3Q0VDG4 424 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 LRP8Q14114 963 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 TAB1Q15750 504 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 AAGABQ6PD74 315 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 CEP97Q8IW35 865 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 SVOPLQ8N434 492 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 HUS1BQ8NHY5 278 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 CHFRQ96EP1 664 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 OR6C1Q96RD1 312 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 SHROOM3Q8TF72 1996 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 RPP14O95059 124 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 RPLP0P05388 317 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 CD63P08962 238 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 ECH1Q13011 328 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 KBTBD8Q8NFY9 601 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 TWSG1Q9GZX9 223 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 TCF7L1Q9HCS4 588 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 GPX6P59796 221 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 SGCAQ16586 387 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 LIN54Q6MZP7 749 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 LIPIQ6XZB0 460 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 RTN4RL1Q86UN2 441 aaPredicted RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 AMER2Q8N7J2 671 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 SOX17Q9H6I2 414 aaPredicted RBP10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 RNPEPL1Q9HAU8 725 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 POFUT2Q9Y2G5 429 aa10.27□□□□□ -0.77
SYNPO2-201ENST00000307142 A0A1B0GVT2 93 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 RCBTB2O95199 551 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 CD1DP15813 335 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 ABOP16442 354 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 RAB25P57735 213 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 HSDL2Q6YN16 418 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC5A8Q8N695 610 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 YIPF7Q8N8F6 280 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 SNIP1Q8TAD8 396 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 A0A1W2PQ72 361 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 MTHFD1P11586 935 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 KRT74Q7RTS7 529 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 ZSCAN4Q8NAM6 433 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 EBF4Q9BQW3 602 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 HHATLQ9HCP6 504 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 PRSS16Q9NQE7 514 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 CDC14CA4D256 554 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 GRXCR2A6NFK2 248 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 VSTM2BA6NLU5 285 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 DRGXA6NNA5 263 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 PTDSS1P48651 473 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 GBX2P52951 348 aaPredicted RBP10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 C5orf22Q49AR2 442 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 PQLC1Q8N2U9 271 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 GJE1A6NN92 205 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 EMC8O43402 210 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 CH25HO95992 272 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 DNAJB1P25685 340 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 C3orf38Q5JPI3 329 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 AHSA2Q719I0 299 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
SYNPO2-201ENST00000307142 OR52E1Q8NGJ3 308 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms