RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZNF404Q494X3 552 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 A0A1B0GVM2 712 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 HTRA2O43464 458 aaPredicted RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 KIAA0513O60268 411 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 STK19P49842 368 aaPredicted RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 SLC29A4Q7RTT9 530 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 PIWIL3Q7Z3Z3 882 aaKnown RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 ESX1Q8N693 406 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 DKKL1Q9UK85 242 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 POFUT2Q9Y2G5 429 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 WDR45Q9Y484 360 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 MANBAO00462 879 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 CBR1P16152 277 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 ARL2P36404 184 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 SOX3P41225 446 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 EIPR1Q53HC9 387 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 TMEM53Q6P2H8 277 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 LRRC52Q8N7C0 313 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 ZNF283Q8N7M2 679 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 NEIL3Q8TAT5 605 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 RCOR3Q9P2K3 495 aaPredicted RBP12.19□□□□□ -0.46
USP38-201ENST00000307017 ERVK-19Q9WJR5 959 aa12.19□□□□□ -0.46
USP38-201ENST00000307017 ZNF850A8MQ14 1090 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 B4GAT1O43505 415 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 SULT1B1O43704 296 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 TLX3O43711 291 aaPredicted RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 ZNF674Q2M3X9 581 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 TMEM69Q5SWH9 247 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 TMPRSS12Q86WS5 348 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 CIDECQ96AQ7 238 aaPredicted RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 ARL6Q9H0F7 186 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 H7C2Y5 167 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 KAT7O95251 611 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 TACSTD2P09758 323 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 JMJD7P0C870 316 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 RAB6AP20340 208 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 PTGER3P43115 390 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 C1orf61Q13536 156 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 CHRFAM7AQ494W8 412 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 RFTN2Q52LD8 501 aaPredicted RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 CCDC28AQ8IWP9 274 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 SORCS1Q8WY21 1168 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 SLAMF7Q9NQ25 335 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 PAK1IP1Q9NWT1 392 aaPredicted RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 RTCAO00442 366 aaKnown RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 UNGP13051 313 aaPredicted RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 SETD7Q8WTS6 366 aaKnown RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 SGCZQ96LD1 299 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 STARD5Q9NSY2 213 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 MYH11P35749 1972 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 MYH2Q9UKX2 1941 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 UBFD1O14562 309 aaKnown RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 ZNF45Q02386 682 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 MBTPS1Q14703 1052 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 PTCHD3Q3KNS1 767 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 SLC36A3Q495N2 470 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 TMEM17Q86X19 198 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 MACROD1Q9BQ69 325 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 MINDY3Q9H8M7 445 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 LSM5Q9Y4Y9 91 aaKnown RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 HEBP2Q9Y5Z4 205 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 PTPRUQ92729 1446 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 FAM72CH0Y354 149 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 SMLR1H3BR10 107 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 FBP2O00757 339 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 RBM34P42696 430 aaKnown RBP12.18□□□□□ -0.46
USP38-201ENST00000307017 FAM72AQ5TYM5 149 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 MBLAC2Q68D91 279 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 FAM72DQ6L9T8 149 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 C14orf80Q86SX3 495 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 FAM72BQ86X60 149 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 TREML1Q86YW5 311 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 SLC15A4Q8N697 577 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 TMEM68Q96MH6 324 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 CD180Q99467 661 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 USP29Q9HBJ7 922 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 VWDEQ8N2E2 1590 aa12.18□□□□□ -0.46
USP38-201ENST00000307017 ANKRD12Q6UB98 2062 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 NRP1O14786 923 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 TXNDC12O95881 172 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PRNPP04156 253 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 FHP07954 510 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PRKAR1BP31321 381 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 TEAD2Q15562 447 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 FRG2Q64ET8 278 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 HS3ST5Q8IZT8 346 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 CDKN2AIPNLQ96HQ2 116 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 RADILQ96JH8 1075 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 FRG2BQ96QU4 278 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 TMEM109Q9BVC6 243 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 WDR26Q9H7D7 661 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PRDM16Q9HAZ2 1276 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PCDHB3Q9Y5E6 796 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PCDHGA11Q9Y5H2 935 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 ROBO1Q9Y6N7 1651 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms