RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 RUNX2Q13950 521 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NSDHLQ15738 373 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TCHHL1Q5QJ38 904 aaPredicted RBP10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 DCAF10Q5QP82 559 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 AGBL2Q5U5Z8 902 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ZCCHC23Q6ZST2 131 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CUZD1Q86UP6 607 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ZCCHC7Q8N3Z6 543 aaKnown RBP10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 GBP7Q8N8V2 638 aaPredicted RBP10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 C8orf44Q96CB5 159 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 WBP1Q96G27 269 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PTCHD1Q96NR3 888 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 KCNA7Q96RP8 456 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HBEGFQ99075 208 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 VIPAS39Q9H9C1 493 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 WDR41Q9HAD4 459 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ATP13A2Q9NQ11 1180 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PRDM9Q9NQV7 894 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PRDM7Q9NQW5 492 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PRTFDC1Q9NRG1 225 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LANCL2Q9NS86 450 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FARSBQ9NSD9 589 aaKnown RBP10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MS4A12Q9NXJ0 267 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FIS1Q9Y3D6 152 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TIMM22Q9Y584 194 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PKD1L2Q7Z442 2459 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 UQCRHLA0A096LP55 91 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TMEM120BA0PK00 339 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 WDR91A4D1P6 747 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 UBFD1O14562 309 aaKnown RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 AZIN1O14977 448 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ATXN7O15265 892 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 BIRC5O15392 142 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ETHE1O95571 254 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HSPA4LO95757 839 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 COX6A1P12074 109 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ITGA3P26006 1051 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HTR6P50406 440 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CCL11P51671 97 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 OR4D2P58180 307 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 RHAGQ02094 409 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TNFRSF17Q02223 184 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ACTN3Q08043 901 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 GALNT1Q10472 559 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SLC13A2Q13183 592 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CHI3L2Q15782 390 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LINC00303Q3SY05 128 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SPIN4Q56A73 249 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TMEM205Q6UW68 189 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 KIRREL2Q6UWL6 708 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LANCL3Q6ZV70 420 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NDUFAF7Q7L592 441 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CPEB2Q7Z5Q1 589 aaKnown RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 UBE3DQ7Z6J8 389 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ANKRD37Q7Z713 158 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 GPR180Q86V85 440 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TMEM151BQ8IW70 566 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ZNF595Q8IYB9 648 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PLPP5Q8NEB5 264 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 OR11G2Q8NGC1 345 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 C9orf43Q8TAL5 461 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MGARPQ8TDB4 240 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TLCD1Q96CP7 247 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CSF3RQ99062 836 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TUBB6Q9BUF5 446 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SLC25A23Q9BV35 468 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SORBS1Q9BX66 1292 aaKnown RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MRPL1Q9BYD6 325 aaKnown RBP10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ZNF160Q9HCG1 818 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 GPR83Q9NYM4 423 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 VPS29Q9UBQ0 182 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TUBD1Q9UJT1 453 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ADAM29Q9UKF5 820 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CPAMD8Q8IZJ3 1885 aa10.35□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LOC102723996A0A087X1L8 192 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 IGHV1-45A0A0A0MS14 117 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 A0A0A6YYD5 115 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 A6NL46 340 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FAM227AF5H4B4 570 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 DNAJB6O75190 326 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 GUCY1B2O75343 617 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 DNAJB5O75953 348 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 GBAP04062 536 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SERPINE1P05121 402 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CHRNGP07510 517 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FAM58BPP0C7Q3 252 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NR2F6P10588 404 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ICAM2P13598 275 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MAOAP21397 527 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PPP2R1BP30154 601 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 BSGP35613 385 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MAPK12P53778 367 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FOXA1P55317 472 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HSD17B7P56937 341 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ACSM2AQ08AH3 577 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 STX4Q12846 297 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SPDYAQ5MJ70 313 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SH2D4BQ5SQS7 431 aa10.34□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CCNYL2Q5T2Q4 361 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms