RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GOLGA7Q7Z5G4 137 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 UBE3DQ7Z6J8 389 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 HORMAD2Q8N7B1 307 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 ACOT4Q8N9L9 421 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 NFAM1Q8NET5 270 aaPredicted RBP24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 HUS1BQ8NHY5 278 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 SSC4DQ8WTU2 575 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 NPAS2Q99743 824 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 SLX1AQ9BQ83 275 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 RHOXF2Q9BQY4 288 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 ZNF358Q9NW07 568 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 PCDHGB6Q9Y5F9 930 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 BLACEA4D250 179 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 LRRC14BA6NHZ5 514 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 GABRR3A8MPY1 467 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 A8MUA0 341 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 H0YIV9 168 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 SMIM24O75264 130 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 MYO1DO94832 1006 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 SCELO95171 688 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 CRYABP02511 175 aaKnown RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 HIST1H1TP22492 207 aaPredicted RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 ATP5A1P25705 553 aaKnown RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 SSR2P43308 183 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 HNRNPFP52597 415 aaKnown RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 DDX39BQ13838 428 aaKnown RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 ZNF766Q5HY98 468 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 DEPDC1Q5TB30 811 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 RPS19BP1Q86WX3 136 aaKnown RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 KIF2BQ8N4N8 673 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 PTGR2Q8N8N7 351 aaPredicted RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 TMEM52Q8NDY8 209 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 TAAR6Q96RI8 345 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 CSF3RQ99062 836 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 CDCP1Q9H5V8 836 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 PNO1Q9NRX1 252 aaKnown RBP24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 XPR1Q9UBH6 696 aa24.73■■□□□ 1.55
CDKN2A-201ENST00000304494 RP1L1Q8IWN7 2480 aaPredicted RBP24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 STX16-NPEPL1H3BU86 382 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 STX16O14662 325 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 CTNSO60931 367 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 SIX3O95343 332 aaPredicted RBP24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 EEF1DP29692 281 aaKnown RBP24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 CD96P40200 585 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 RAP1GDS1P52306 607 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 ZNF793Q6ZN11 406 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 C7orf57Q8NEG2 295 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 B3GNT7Q8NFL0 401 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 DNAJB8Q8NHS0 232 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 RGMAQ96B86 450 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 MTBPQ96DY7 904 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 PHF21BQ96EK2 531 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 PSMG3-AS1Q96PY0 264 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 MRPL57Q9BQC6 102 aaKnown RBP24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 DEFB126Q9BYW3 111 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 ADAP2Q9NPF8 381 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 DMRT3Q9NQL9 472 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 KCMF1Q9P0J7 381 aa24.72■■□□□ 1.55
CDKN2A-201ENST00000304494 LRRK2Q5S007 2527 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 CNTRLQ7Z7A1 2325 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 RIPK2O43353 540 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 MAN1A2O60476 641 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 DDAH2O95865 285 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 CLCN2P51788 898 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 ARFIP1P53367 373 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 OC90Q02509 493 aaPredicted RBP24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 OR1C1Q15619 314 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 ZNF324BQ6AW86 544 aaPredicted RBP24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 OR4C11Q6IEV9 310 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 CNPY4Q8N129 248 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 L3MBTL4Q8NA19 623 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 MDS2Q8NDY4 140 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 NR4A3Q92570 626 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 MTERF1Q99551 399 aaKnown RBP24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 MRPL46Q9H2W6 279 aaKnown RBP24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 OR51B5Q9H339 312 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 ANKRD10Q9NXR5 420 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 PPIEQ9UNP9 301 aaKnown RBP24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 SLC5A6Q9Y289 635 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 HECTD1Q9ULT8 2610 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 ESPL1Q14674 2120 aa24.71■■□□□ 1.55
CDKN2A-201ENST00000304494 SAP18O00422 153 aaKnown RBP24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 RTCAO00442 366 aaKnown RBP24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 FCHO1O14526 889 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 SH3BGRLO75368 114 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 CLDN9O95484 217 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 CD46P15529 392 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 PTX3P26022 381 aaPredicted RBP24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 ARL1P40616 181 aaPredicted RBP24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 STX4Q12846 297 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 ELAVL1Q15717 326 aaKnown RBP24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 CPSF6Q16630 551 aaKnown RBP eCLIP24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 ADGRD1Q6QNK2 874 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 CLNKQ7Z7G1 428 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 APCDD1LQ8NCL9 501 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 ATP6V1E2Q96A05 226 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 VMP1Q96GC9 406 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 C5orf34Q96MH7 638 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 SIGLEC12Q96PQ1 595 aa24.7■■□□□ 1.54
CDKN2A-201ENST00000304494 MAPKAP1Q9BPZ7 522 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms