RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ACSL6Q9UKU0 697 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PCDHGB1Q9Y5G3 927 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 A0A0U1RQS6 177 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CPNE6O95741 557 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ACVR1BP36896 505 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HERV-K104P61576 105 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LMAN2Q12907 356 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PMS2P3Q13401 168 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RAB39AQ14964 217 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IER5LQ5T953 404 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FCRLBQ6BAA4 426 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TMEM225Q6GV28 225 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C9orf43Q8TAL5 461 aaPredicted RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IGSF8Q969P0 613 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC30A2Q9BRI3 323 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NLGN3Q9NZ94 848 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM227AF5H4B4 570 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 EEF1E1O43324 174 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF675Q8TD23 568 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KIAA1191Q96A73 305 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 S100A16Q96FQ6 103 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PSKH2Q96QS6 385 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CCDC86Q9H6F5 360 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TM9SF3Q9HD45 589 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TMEM5Q9Y2B1 443 aa13.07□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DFNA5O60443 496 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 AHSA1O95433 338 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GNRHRP30968 328 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC6A6P31641 620 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CDKN2DP55273 166 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR6Q1Q8NGQ2 317 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR51A7Q8NH64 312 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KCNK12Q9HB15 430 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SERTAD3Q9UJW9 196 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TMED5Q9Y3A6 229 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 A0A1W2PPW3 197 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SMCO3A2RU48 225 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 METTL21EPA6NDL7 271 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FPR1P21462 350 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HOXD13P35453 343 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MLLT6P55198 1093 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC26A5P58743 744 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 POU6F2P78424 691 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLAMF1Q13291 335 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GINS1Q14691 196 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HYAL4Q2M3T9 481 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CCDC58Q4VC31 144 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CRTC1Q6UUV9 634 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ARSKQ6UWY0 536 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM217AQ8IXS0 508 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MTMR14Q8NCE2 650 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PAAF1Q9BRP4 392 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RNF38Q9H0F5 515 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PRTFDC1Q9NRG1 225 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IL20RAQ9UHF4 553 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CA14Q9ULX7 337 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CAPN5O15484 640 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IFNA7P01567 189 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FGF3P11487 239 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 BCKDHAP12694 445 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SEC23BQ15437 767 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SHFQ7M4L6 423 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LHFPL3Q86UP9 236 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SAMD12Q8N8I0 201 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC25A44Q96H78 314 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SRA1Q9HD15 236 aaKnown RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 JMJD7P0C870 316 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MAGEA11P43364 429 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GALK2Q01415 458 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF763Q0D2J5 394 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RAB6CQ53S08 254 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RAB11FIP2Q7L804 512 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 UBE2Q1Q7Z7E8 422 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RIT1Q92963 219 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM210AQ96ND0 272 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR1F2PQ96R84 312 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RAB6CQ9H0N0 254 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 REEP4Q9H6H4 257 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLIT2O94813 1529 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C8BP07358 591 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF30P17039 623 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 E2F1Q01094 437 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ABRAXAS2Q15018 415 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NANOGP8Q6NSW7 305 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 STOML3Q8TAV4 291 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MUS81Q96NY9 551 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ARHGAP9Q9BRR9 750 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM124BQ9H5Z6 455 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NANOGQ9H9S0 305 aa13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZFR2Q9UPR6 939 aaKnown RBP13.06□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PLIN4Q96Q06 1357 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms