RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 ABI3BPQ7Z7G0 1075 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 TRMT61AQ96FX7 289 aaKnown RBP17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 BARHL1Q9BZE3 327 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 CARNS1A5YM72 827 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 ARHGEF33A8MVX0 844 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 HLA-EP13747 358 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 SOX6P35712 828 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 CRATP43155 626 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 CLPPQ16740 277 aaPredicted RBP17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 LEXMQ3ZCV2 418 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 SERPINA11Q86U17 422 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 HOMEZQ8IX15 550 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 GPR156Q8NFN8 814 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 CHAC2Q8WUX2 184 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 MED8Q96G25 268 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 PITX2Q99697 317 aa17.05■□□□□ 0.32
TSPAN17-201ENST00000298564 E7EQ34 232 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 TSPAN6O43657 245 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 SLCO2B1O94956 709 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 CTSCP53634 463 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 WNT3P56703 355 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 NTHL1P78549 312 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 COX20Q5RI15 118 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 CCDC190Q86UF4 302 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 THOC6Q86W42 341 aaKnown RBP17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 FAM9CQ8IZT9 166 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 LMNTD1Q8N9Z9 388 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 TRPV5Q9NQA5 729 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 NDUFAF4Q9P032 175 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 MEIOCA2RUB1 952 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 FAM172BPA6NC97 362 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 SEMG1P04279 462 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 HOXC5Q00444 222 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 SSX1Q16384 188 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 HENMT1Q5T8I9 393 aaKnown RBP17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 WDR53Q7Z5U6 358 aaPredicted RBP17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 LGI4Q8N135 537 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 RASGEF1AQ8N9B8 481 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 COQ8BQ96D53 544 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 MRGPRX3Q96LB0 322 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 ZSWIM3Q96MP5 696 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 NXF2Q9GZY0 626 aaKnown RBP17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 CRISPLD2Q9H0B8 497 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 ACSL6Q9UKU0 697 aa17.04■□□□□ 0.32
TSPAN17-201ENST00000298564 A0A1W2PQ09 198 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 EFCAB10A6NFE3 127 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 PRAMEF25A6NGN4 478 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 TMEM229AB2RXF0 380 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 CPNE3O75131 537 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 GCM2O75603 506 aaPredicted RBP17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 RHOP08100 348 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 SNRPD2P62316 118 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 GALK2Q01415 458 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 GAB1Q13480 694 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 NAE1Q13564 534 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 CDK10Q15131 360 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 OR4K1Q8NGD4 311 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 COL21A1Q96P44 957 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 CCDC177Q9NQR7 707 aaPredicted RBP17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 SH3BP4Q9P0V3 963 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 SOX14O95416 240 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 ETFAP13804 333 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 PRPS1L1P21108 318 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 XPAP23025 273 aaPredicted RBP17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 GPR50Q13585 617 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 DOC2AQ14183 400 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 E2F2Q14209 437 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 HKDC1Q2TB90 917 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 SYTL3Q4VX76 610 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 PAQR6Q6TCH4 344 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 RFPL4BQ6ZWI9 263 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 TRAM1L1Q8N609 369 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 OR5AK3PQ8NH89 298 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 CSGALNACT1Q8TDX6 532 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 ASPNQ9BXN1 380 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 IRF2BPLQ9H1B7 796 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 C11orf16Q9NQ32 467 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 VPS29Q9UBQ0 182 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 MKLN1Q9UL63 735 aa17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 GOLGA4Q13439 2230 aaKnown RBP17.03■□□□□ 0.32
TSPAN17-201ENST00000298564 GSTM1P09488 218 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 SYN1P17600 705 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 IL1RNP18510 177 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 NNMTP40261 264 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 DCDC1P59894 354 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 STARD3Q14849 445 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 LIPJQ5W064 366 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 ZNF438Q7Z4V0 828 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 RAB43Q86YS6 212 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 OR7G1Q8NGA0 311 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 BTN2A2Q8WVV5 523 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 FCGR1BQ92637 280 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 TMEM159Q96B96 161 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 HHIPQ96QV1 700 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 ANKHQ9HCJ1 492 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 GIMAP4Q9NUV9 329 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 ITM2BQ9Y287 266 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 PCDHGB3Q9Y5G1 929 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 SMLR1H3BR10 107 aa17.02■□□□□ 0.32
TSPAN17-201ENST00000298564 SCN2BO60939 215 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms